Gene Information

Name : ELI_2406 (ELI_2406)
Accession : YP_003960351.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Virulence
Product : NAD dependent epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 2223656 - 2224630 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGGGATATGAAAACATCACCTTCCCCCAAGAGACCAAATTTCTGATCACCGGCGGCGCAGGCTTTATCGGCTCCAACCT
CTGCGAAGCCCTGCTAAAACGCGGACACTTTGTCCGATGCCTGGACGACCTCTCCACCGGAAAAGCAGAAAACATCCAGC
CCTTTTTAGAAAACTCAAACTTCGAATTCATCAAAGGCGACATTCGAGACCTCGACACCTGCATGAACGCCTGCAAGAAC
ATCGACTACGTCTCCCACCAGGCCGCCTGGGGAAGCGTGCCCCGAAGCATCGAGATGCCCCTGGTCTACGAAGAAATCAA
TATCAAAGGCACCCTCAACATGCTCGAAGCCGCCAGACAGAACAACGTGAAAAAGTTCGTCTACGCCTCCTCCTCATCCG
TGTACGGCGATGAGCCCACCCTGCCCAAGAAAGAAGGCAGAGAAGGCAATCTGCTCTCTCCTTACGCCCTGACCAAAAGA
ACCAATGAAGAATACGCCAGGCTCTACACCGAGCTTTATGGCCTGGAAACCATCGGTTTTCGCTACTTCAACGTCTTTGG
CAGAAGACAGGACCCCGATGGCGCTTACGCTGCCGTCATCCCAAAGTTTGTGAGTTCACTGCTTTATAACATCGCACCAA
AGATCAATGGAGACGGCACCCAGTCCAGGGACTTCACTTATATTGAAAATGTCATTGAAGCCAATTTGAAAGGCATGCAG
GCTCCCAGGGAAGCCGCCGGAGAAGCCTTCAACATCGCCTACGGCGGGCAGGTTAACCTCAATGAGCTATACCAGAAGCT
CAGCGAATTGCTGGGTAAAAAGATCGAGCCGGTCTATGGCCCGGAACGGGCAGGGGATATCAAACACTCCAATGCAGATA
TTGACAAGGCGAGAAAATTTCTAAAATATGCGCCGGAGTATAGCTTTGAGCGGGGGATTGAGTTGACGATTGCGTGGTAT
CGGGAGATGTTGTAA

Protein sequence : 
MGYENITFPQETKFLITGGAGFIGSNLCEALLKRGHFVRCLDDLSTGKAENIQPFLENSNFEFIKGDIRDLDTCMNACKN
IDYVSHQAAWGSVPRSIEMPLVYEEINIKGTLNMLEAARQNNVKKFVYASSSSVYGDEPTLPKKEGREGNLLSPYALTKR
TNEEYARLYTELYGLETIGFRYFNVFGRRQDPDGAYAAVIPKFVSSLLYNIAPKINGDGTQSRDFTYIENVIEANLKGMQ
APREAAGEAFNIAYGGQVNLNELYQKLSELLGKKIEPVYGPERAGDIKHSNADIDKARKFLKYAPEYSFERGIELTIAWY
REML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-61 49
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-61 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_2406 YP_003960351.1 NAD dependent epimerase VFG0430 Protein 5e-62 49