Gene Information

Name : ELI_1649 (ELI_1649)
Accession : YP_003959598.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1558549 - 1559271 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGGACTGGAAGTATAAGCACAGGAGGGAAAAAGTGGAAATTTTAAGATGTGAGGGAATTACAAAAGTCTACGGCGCCGG
CGAAAACGCCGTGCACGCCCTGAGAGGCATTGATTTTACCGTCCGCAAGGGCGAATTCGTATCCATTATCGGAGCATCGG
GCTCGGGGAAATCCACCCTGCTGCACATTGTCGGCGCGGTGGACAGCCCCACCGAGGGCAGGGTGTGGGTCGGCGGGGAG
GAAATTTCTGCTCTGAGCAGAAAAGAAGCAGCTCTTTTCAGGCGCAGGAGCGTGGGGCTCATCTACCAGTTTTATAACCT
GATCCCCACTCTCACGGTGGAGCGGAACATCAAGCTGCCCCTGCTTCTGGACAGGACCGAGCCCCAATCCCAGGACTTCG
AGGCCATTGTCGGGGCCCTGGGGCTGGAGGATAAGCTGAACGCCCTGCCCAGCCAGCTGTCCGGCGGGCAGCAGCAGCGC
ACCGCCATTGCGCGGTCTCTGCTGTACCGGCCAGCCCTGCTGCTGGCCGACGAGCCCACCGGCAACCTGGATCAGGAAAA
CTCCAGGGAGATCATGGCAATGCTGAAGCGGTTTAACCAGACCCTCAAGCAGACCATTCTGGTCATCACCCATGACGAGC
TGGTGGCCAGAGCGGCAGACCGCGTGATTTGGATTGAGGACGGCCGCATCGTCTCCAATGCGCCGGCGGCAGGGGAGGTC
TGA

Protein sequence : 
MDWKYKHRREKVEILRCEGITKVYGAGENAVHALRGIDFTVRKGEFVSIIGASGSGKSTLLHIVGAVDSPTEGRVWVGGE
EISALSRKEAALFRRRSVGLIYQFYNLIPTLTVERNIKLPLLLDRTEPQSQDFEAIVGALGLEDKLNALPSQLSGGQQQR
TAIARSLLYRPALLLADEPTGNLDQENSREIMAMLKRFNQTLKQTILVITHDELVARAADRVIWIEDGRIVSNAPAAGEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_1649 YP_003959598.1 ABC-type antimicrobial peptide transport system CP001581.1.gene598.p Protein 1e-50 52
ELI_1649 YP_003959598.1 ABC-type antimicrobial peptide transport system CP001581.1.gene798.p Protein 2e-53 52
ELI_1649 YP_003959598.1 ABC-type antimicrobial peptide transport system NC_008702.1.4606598. Protein 9e-34 43