Gene Information

Name : ELI_1637 (ELI_1637)
Accession : YP_003959586.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1549312 - 1550013 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAATTCTGATTATAGAAGACGAACTTAATATATTTGAGCTGATTAAATTCAATCTGGAAGCCCAGGGATTTGA
GGTGGCGGGGGTCCACGAGGGGACCGGCGCGGTTGAGAAAATCGTGGATATCCGGCCGGATCTGATCATTCTGGATTTAA
TGCTGCCGGGCAAGGACGGGCTCACCATCTGCCGCGAGGTGCGGGCGGATAAAAACCTGTCTTACATTCCAGTCATCATG
CTCACCGCCAAGAGCGAGGAGTTTGACAAGGTCCTTGGCCTAGAAATGGGCGCAGACGACTATATGACCAAGCCCTTCAG
CGTGAAGGAGCTCTACGCCCGGGTAAAGGCTGTCCTGCGGCGCACCGAGATGATCAAAAGCTCAGACACAGAGGAGATCG
CAGTGGGCAGCCTGCGCATTCTGCCCGGCTCCTTCGAGGTATACAAAAACGGCAAAAAGCTGTCGCTGACGCTGAAGGAA
TACGAGCTGCTCCTGTATCTGGCAAACAATAAGAACAAGGTGCTGACCCGGGATCAGCTGCTGGACGAAATCTGGGGCTA
TGAGTATTACGGCGAGACCCGGACAGTGGATGTCCACATCCGTTACCTGCGGAAGAAGATTGAGGACGACCAGGAAAAAT
ACATCGAAACCGTGCGCGGCGTGGGCTACCGCCTGGTAGAAAACCTGGGAGGTGATCAATGA

Protein sequence : 
MKKILIIEDELNIFELIKFNLEAQGFEVAGVHEGTGAVEKIVDIRPDLIILDLMLPGKDGLTICREVRADKNLSYIPVIM
LTAKSEEFDKVLGLEMGADDYMTKPFSVKELYARVKAVLRRTEMIKSSDTEEIAVGSLRILPGSFEVYKNGKKLSLTLKE
YELLLYLANNKNKVLTRDQLLDEIWGYEYYGETRTVDVHIRYLRKKIEDDQEKYIETVRGVGYRLVENLGGDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-31 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-30 44
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-26 41
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-26 41
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_1637 YP_003959586.1 response regulator NC_002952.2859905.p0 Protein 3e-51 54
ELI_1637 YP_003959586.1 response regulator NC_002758.1121668.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_009641.5332272.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_013450.8614421.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_007793.3914279.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_003923.1003749.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_007622.3794472.p0 Protein 3e-51 54
ELI_1637 YP_003959586.1 response regulator NC_002745.1124361.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_009782.5559369.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator NC_002951.3237708.p0 Protein 4e-51 54
ELI_1637 YP_003959586.1 response regulator HE999704.1.gene2815. Protein 4e-44 53
ELI_1637 YP_003959586.1 response regulator NC_012469.1.7686381. Protein 3e-36 49
ELI_1637 YP_003959586.1 response regulator NC_012469.1.7685629. Protein 5e-43 49
ELI_1637 YP_003959586.1 response regulator AE015929.1.gene1106. Protein 2e-30 47
ELI_1637 YP_003959586.1 response regulator NC_002952.2859858.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_007622.3794948.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_003923.1003417.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_013450.8614146.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_002951.3238224.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_007793.3914065.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_002758.1121390.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_010079.5776364.p0 Protein 5e-34 46
ELI_1637 YP_003959586.1 response regulator NC_010410.6002989.p0 Protein 7e-31 45
ELI_1637 YP_003959586.1 response regulator NC_011595.7057856.p0 Protein 7e-31 45
ELI_1637 YP_003959586.1 response regulator NC_010400.5986590.p0 Protein 5e-30 45
ELI_1637 YP_003959586.1 response regulator NC_005054.2598277.p0 Protein 9e-31 45
ELI_1637 YP_003959586.1 response regulator NC_014475.1.orf0.gen Protein 9e-31 45
ELI_1637 YP_003959586.1 response regulator AE016830.1.gene1681. Protein 4e-37 44
ELI_1637 YP_003959586.1 response regulator HE999704.1.gene1528. Protein 2e-25 44
ELI_1637 YP_003959586.1 response regulator AF155139.2.orf0.gene Protein 2e-30 44
ELI_1637 YP_003959586.1 response regulator AE000516.2.gene3505. Protein 9e-33 44
ELI_1637 YP_003959586.1 response regulator CP000034.1.gene2186. Protein 2e-29 44
ELI_1637 YP_003959586.1 response regulator NC_002695.1.916589.p Protein 2e-29 44
ELI_1637 YP_003959586.1 response regulator BAC0039 Protein 2e-29 44
ELI_1637 YP_003959586.1 response regulator FJ349556.1.orf0.gene Protein 2e-30 43
ELI_1637 YP_003959586.1 response regulator CP004022.1.gene1676. Protein 2e-25 43
ELI_1637 YP_003959586.1 response regulator CP000647.1.gene2531. Protein 1e-28 43
ELI_1637 YP_003959586.1 response regulator BAC0596 Protein 4e-29 43
ELI_1637 YP_003959586.1 response regulator CP001138.1.gene2239. Protein 4e-29 43
ELI_1637 YP_003959586.1 response regulator CP001918.1.gene3444. Protein 1e-27 42
ELI_1637 YP_003959586.1 response regulator U35369.1.gene1.p01 Protein 6e-27 41
ELI_1637 YP_003959586.1 response regulator AF310956.2.orf0.gene Protein 5e-27 41
ELI_1637 YP_003959586.1 response regulator AE016830.1.gene2255. Protein 6e-27 41
ELI_1637 YP_003959586.1 response regulator AM180355.1.gene1830. Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_1637 YP_003959586.1 response regulator VFG1389 Protein 4e-27 45
ELI_1637 YP_003959586.1 response regulator VFG1563 Protein 4e-31 44
ELI_1637 YP_003959586.1 response regulator VFG1702 Protein 2e-30 44
ELI_1637 YP_003959586.1 response regulator VFG0596 Protein 3e-22 41