Gene Information

Name : ELI_1563 (ELI_1563)
Accession : YP_003959512.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1474911 - 1475606 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCATAAAGCACTAGTACTTTTGGTTGAGGATGAAAAGGGAATAAGGAATTTTATATCCACTGTTCTCGATGTTAA
TAATTACCGTGTTGTGGAGGCCAGAGACGGGAAGGAAGCCCTTGAGCTTTTTACCTCTCGGTGCCCAGATTTAATCCTGC
TGGATCTTGGTCTCCCAGATATGGACGGCATAGAGGTTTTAAAAACGATCCGGGGATGGTCGGGCATACCGATTATTGTC
GTTTCAGCAAGGGGCCATGAGCGTGAAAAGGTTGAGGCGCTTGATCTGGGAGCAGATGACTACATCACCAAACCCTTTGG
GACTTCGGAGCTGCTGGCCCGTATCCGTACAGCTATGCGCCATCAGCAGGTAACGGTGGATGTACCGGAGCGCACAATTT
TTTCTGTAGGAGACCTGACCATTGACTTTGATAAAAGACTGGTCACCCTGAATAATAATCCAGTCCATTTTACCCCTATC
GAGTATAAAATATTGGAGATTTTGACCCAGTATCCCGGAAAGGTGGTTACCTATGACCAGATTATTAAAGATATATGGGG
ACCTTATACCAACGAAAACCAGACACTTCGGGTAAACATGGCAAACATCCGCCGGAAAATTGAAAAAAACCCCGCAGAGC
CAAAGTATATTTTGACTGAGGTGGGCGTGGGCTACCGATTTGTAGATGAAATTTGA

Protein sequence :
MSHKALVLLVEDEKGIRNFISTVLDVNNYRVVEARDGKEALELFTSRCPDLILLDLGLPDMDGIEVLKTIRGWSGIPIIV
VSARGHEREKVEALDLGADDYITKPFGTSELLARIRTAMRHQQVTVDVPERTIFSVGDLTIDFDKRLVTLNNNPVHFTPI
EYKILEILTQYPGKVVTYDQIIKDIWGPYTNENQTLRVNMANIRRKIEKNPAEPKYILTEVGVGYRFVDEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 7e-48 53
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 5e-48 53
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 4e-30 45
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 5e-30 45
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 5e-30 45
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-30 45
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 5e-30 45
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 7e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_1563 YP_003959512.1 hypothetical protein NC_012469.1.7685629. Protein 5e-26 41