Gene Information

Name : ELI_1231 (ELI_1231)
Accession : YP_003959180.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1196502 - 1197185 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTTACTCACAGTAAAAAAACTGACAAAAATTTACGGGGACGGCGACGCCCGTGTAGAAGCCCTGAAAAACGTTTC
CTTTAATATCACAAAGGGCAAATTCGTGGCGGTTGTGGGCGAATCCGGCTCTGGTAAAACCACATTGTTCAATACCCTTG
GGGCTTTGGATACCCCGACGAAGGGGCAGGTTTTTATCGACGGCAAGGATATCTTCTCCATGAAGGAGGAGCAGCTCACC
ATCTTCCGGAGACGCAGCATTGGTTTTATCTTCCAGTCCTACAACCTGATTCCCGAGCTGAGCGTAGAGCAGAACATCAT
CTTCCCCCTCCTGCTCGATTATCAAAAGCCCGATCAGGCCTATGTGGAGGAGCTTCTGGAGGTTCTCGGGCTAAGGGAGC
GCAGAAGCCACCTGCCGCGGCAGCTCTCCGGCGGGCAGCAGCAGCGTGTGGCCATCGGCAGGGCCTTAGTCACCCGGCCC
ATGCTCATTCTGGCCGACGAGCCCACGGGCAACCTGGACAGCAAAAACAGCCGTGAGGTTATCTCTCTGCTCAAATCCAC
CTCCAGGCACTACCGTCAGACCATTCTCATGATCACCCACAACCCTGCCATCGCGCAGCAGGCCGACCGGGTGCTTCAGG
TTTCTGACGGTTTCCTCACCGATCTGGGAGGTGCCCTGCAATGA

Protein sequence : 
MNLLTVKKLTKIYGDGDARVEALKNVSFNITKGKFVAVVGESGSGKTTLFNTLGALDTPTKGQVFIDGKDIFSMKEEQLT
IFRRRSIGFIFQSYNLIPELSVEQNIIFPLLLDYQKPDQAYVEELLEVLGLRERRSHLPRQLSGGQQQRVAIGRALVTRP
MLILADEPTGNLDSKNSREVISLLKSTSRHYRQTILMITHNPAIAQQADRVLQVSDGFLTDLGGALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_1231 YP_003959180.1 ABC transporter CP001581.1.gene798.p Protein 8e-74 74
ELI_1231 YP_003959180.1 ABC transporter CP001581.1.gene598.p Protein 5e-52 54
ELI_1231 YP_003959180.1 ABC transporter NC_008702.1.4606598. Protein 2e-32 43
ELI_1231 YP_003959180.1 ABC transporter NC_012469.1.7686878. Protein 8e-37 42