Gene Information

Name : STAUR_7364 (STAUR_7364)
Accession : YP_003956947.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9028115 - 9028990 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGTTCGAGTTCATCCAGGCGCAGAAGGCCCACTTCCCGGTGGAGTTCCTGTGTGAGCAGTTGGGCGTGTCGCGCTC
GGGCTTCTACGCCTGGAGCCGCCGCCCAGCCTCTGCCCGACAGGAGGAAGACCAGCGGCTGGCGGCCGAGGTGGCCCAAG
CCCACCGAGACAGCCGCGGGGTGTACGGCAGCCCGCGGGTGCACGCGCAGCTGCGAGCGCAAGGCCGCCGGGTGAGCCGC
AAGCGCGTGGCGCGGCTCATGGGGCAGCAGAAGCTGGCCGCCCGCCGCAGAGGCCGCCGGGTGTGCACCACGGACTCCAG
GCATGGCCTGCCGGTGGCCCCCAACGTGCTCAACAGGGACTTCAGCCCCCAGGCCCCCAACCGCACCTGGGCCACGGACA
TCACCTACGTGTGGACAGCCGAAGGGTGGCTGTACCTGGCGGTGGTGCTGGACCTGTTCAGCCGCAAGGTGGTGGGCTGG
GCCATGGGCGAGCACATCGACCGGCACCTGGTACTCTCAGGCTTGGAGATGGCCCTGCAAGGGCGCCAGCCTCCCAAGGG
GCTCCTGCACCACTCGGACCGGGGCAGCCAGTACGCCAGTACCGACTACCAGCAGGCGCTGGCCTCTCGAGGCATTGAGT
GCAGCATGTCCAGGAAGGGCAACTGCTGGGACAACGCGGTGGTGGAGAGCTTCTTCAGCAGCCTGAAGCAGGAACTGGTC
TACCGGACTGACTTCGCCACCCGTCAGCAGGCTCGCTCGGCCCTCTTCGAGTACATCGAGGTTTTCTACAATCGGCAGCG
GCGGCACTCGACGCTGGGCTACATGAGCCCGGTGGACTTTGAGAACGCCACCCTACCTGTTACGTTGGCAGCTTAA

Protein sequence : 
MKFEFIQAQKAHFPVEFLCEQLGVSRSGFYAWSRRPASARQEEDQRLAAEVAQAHRDSRGVYGSPRVHAQLRAQGRRVSR
KRVARLMGQQKLAARRRGRRVCTTDSRHGLPVAPNVLNRDFSPQAPNRTWATDITYVWTAEGWLYLAVVLDLFSRKVVGW
AMGEHIDRHLVLSGLEMALQGRQPPKGLLHHSDRGSQYASTDYQQALASRGIECSMSRKGNCWDNAVVESFFSSLKQELV
YRTDFATRQQARSALFEYIEVFYNRQRRHSTLGYMSPVDFENATLPVTLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-63 50
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-63 50
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-63 50
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-58 49
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 7e-58 49
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-57 49
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-57 49
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-58 48
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-57 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 8e-58 48
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 8e-58 48
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 8e-58 48
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-51 46
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-51 46
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-51 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-43 45
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-43 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-49 43
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-38 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-38 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-36 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-36 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-36 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-36 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 5e-33 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_7364 YP_003956947.1 integrase VFG1706 Protein 4e-58 49
STAUR_7364 YP_003956947.1 integrase VFG1631 Protein 4e-49 43
STAUR_7364 YP_003956947.1 integrase VFG0785 Protein 6e-37 41
STAUR_7364 YP_003956947.1 integrase VFG1484 Protein 3e-33 41