Gene Information

Name : STAUR_6858 (STAUR_6858)
Accession : YP_003956441.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 8378828 - 8380261 bp
Length : 1434 bp
Strand : -
Note : -

DNA sequence : 
ATGCGACGAGCAAAGATTGTCTGCACCCTTGGTCCCGCCAGCCAGAGCCAGGACATGTTAGAGGCCCTCATCGAGGCCGG
CATGGACGTGGCCCGGTTGAACTTCTCCCACGGCAGTCACGAGCAGCACGCGGAGAACATCGCCAAACTCCGCGCGGCTT
CGCTGAAGCTTCGCAAGGCGGTGGGCATCCTCGGAGACCTGCAAGGACCGAAGATCCGCACGGGCCGCTTCATCACCGGC
AGCACGGTGCTGAAGGAAGGCGCCATCTTTTCCATCACCACCGACGAGAGCGTGAAGGGCAACGACGACATCGTGTCCAC
CACGTACGCGCACCTGGCGGCGGACGTGAATCCCGGGGACCGCATCCTCTTGGATGACGGCCTGCTGGAGCTCAAGGTCC
TCGAGACGGACAAGAAGCAGCTCCTGCGCACGCAGGTCGTCATCGGCGGCACGCTGAAGAACAACAAGGGCATCAACCTG
CCGGGCGTGGCGGTGCGCGCCGACGCGCTGACGCCGAAGGACCGCGAGGACCTCGTCTTCGGCATCAAGGAAGGCGTGGA
CTTCCTGGCGCTGTCCTTCGTTCGCCAGCCGGCGGACATCGAGCTGGCGCGCCAGGCCATGGCGGAGGCGGGCCGGCAGG
TGCCCATCGTCGCCAAGCTGGAGAAGCCGGAGGCCATCGCGCGGCTGGACGCCATCCTGGACAAGACGGACGGGGTGATG
GTGGCGCGCGGCGACCTGGGCGTGGAGATTCCCCCCGAGGAGGTGCCGGCCGTCCAGAAGGACATCATCCGGCGCTCCAA
CCAGCGCGGCCTGCCGGTCATCGTGGCCACGCAGATGCTCAACTCGATGATCGAGAACCCCCGCCCCACGCGCGCGGAGG
CCAGCGACGTGGCCAACGCCGTGTTCGACGGGGCGGACGCGGTCATGCTCTCGGGCGAGACGGCCAGCGGCCGCTACCCC
ATCGAGTCGGTGCAGATGATGGACCGCATCGTCCTGGCGGCCGAGTCGGCGGGTCGGGCGCAGTCGTCGCTGGGCCGGAT
CCCGGATGGGCCCATCGGCGTGCCCTCGCACTTCCCGGACGTGATTGCCCGGGTGGCGTGCCAGGCGGCGCAGGCGAGCG
GCGCTTCGCTCATCGCGGCGTTCACGCTGTCGGGCGTGACGGCGCGGCTGCTGGCGCACTACCGGCCGGCGGTCCCCATC
GTGGCGTTCAGCCCGAACCAGGAAGTGCGCCGCCGCCTGGCGCTGCTCTGGGGCGTGGTGCCGCGGGTGCTGGAGCCCAT
CCAGGAGACCGAGGCGATGGTGAAGCGCGTGGAGGAGGAACTGCTGGCGCGCGGACTGGCGCGCAAGGGCGAGCGCATCG
TCATCGTCTTTGGCGCGCCCGTGGGACAGCCAGGGAAGATCAACAGCCTGCGCCTGCACACCATCCAGGGCTGA

Protein sequence : 
MRRAKIVCTLGPASQSQDMLEALIEAGMDVARLNFSHGSHEQHAENIAKLRAASLKLRKAVGILGDLQGPKIRTGRFITG
STVLKEGAIFSITTDESVKGNDDIVSTTYAHLAADVNPGDRILLDDGLLELKVLETDKKQLLRTQVVIGGTLKNNKGINL
PGVAVRADALTPKDREDLVFGIKEGVDFLALSFVRQPADIELARQAMAEAGRQVPIVAKLEKPEAIARLDAILDKTDGVM
VARGDLGVEIPPEEVPAVQKDIIRRSNQRGLPVIVATQMLNSMIENPRPTRAEASDVANAVFDGADAVMLSGETASGRYP
IESVQMMDRIVLAAESAGRAQSSLGRIPDGPIGVPSHFPDVIARVACQAAQASGASLIAAFTLSGVTARLLAHYRPAVPI
VAFSPNQEVRRRLALLWGVVPRVLEPIQETEAMVKRVEEELLARGLARKGERIVIVFGAPVGQPGKINSLRLHTIQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-77 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-77 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-77 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-76 43
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_6858 YP_003956441.1 pyruvate kinase VFG0479 Protein 1e-77 43