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Name : STAUR_6527 (STAUR_6527) Accession : YP_003956111.1 Strain : Stigmatella aurantiaca DW4/3-1 Genome accession: NC_014623 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 7994214 - 7995746 bp Length : 1533 bp Strand : - Note : - DNA sequence : ATGCCGAATGGCCCCGACGGTTTCTCCGAACTCTCCCAGTTTCAGCTCGATCGCAACTCCCTGCGGCTTTTGCCCGAGCC CTTCTGCCGCCGGCACCTCGTGGTGGTCCTGGGCAAGGTCGAGCCGGAGAACCCGAACGCCACGGTGACGGTGGGCATGG TGCGGCCGGATGCCGTGCACGTCCTCCAGCAGATTGGAGATCTGCTGGAGCGTCCCATCCAGCCGGTGCGGCTCAACCGG TACGAGGTCGAATCCGCCCTTCAGGCGGGCTTTGGCTCTGGGCCTCGCGTGCTGGCGAATCTCGTCATTCGCCCCGGACC GCTCTCCAAGTCCCAGCCGTCCGCCGTGGAACTCGTCAACAACATCCTCGTCATGGCGGTGGACAAGAAGTCCTCGGACA TCCACATCGAGTGCTACCCGGGGGATGTGGACTTCCGCCTGCGGATCGACGGCATCCTGCACCAGATGTACACGGACATG GATCCGGAGACGGTCCACGAGGTGGTCAGCCGGATCAAGATCCTCGCGGAGCTGGACATCACCGAGCGCCGCAAGCCCCA GGATGGCCGCATCCGCGCGGTCATCGACCGGGGGGAGGAGGACCGCAAGGTCATCGACTACCGCGTGAGCGTGGTGCCGA GTCCCACGGGCGAGGACGTCGTCATCCGCATCCTCGACTCGGACGCCGGGCTCGTTCCGGTGAGCAAGCTCGGGATGAAT GCCGAGATGCAGCGCATCTTCCTGCAACTGCTCGTCAACCCCGAGGGGCTCGTGCTCGTGACGGGGCCCACGGGCAGCGG GAAGACGACCACGCTGTATTCGGCCCTGGCCCAGCTCAATGACGGGCGGCGGAAGATCATCACCGCCGAGGATCCGATCG AGTACTTCGTCCCCAAGGTCAACCAGAAGCAGGTCAGCCCGCAGATGCCTTACGCATCGCTGTTGCGCGCGCTTCTGCGT CAGGATCCGAACGTGTTGCTGGTGGGAGAAATCCGCGACCTGGAGACGGGCAGCACGGCCCTCAATGCGGCCCGCACCGG CCACCTCGTCCTGGGCACGCTCCACACCGCGGACGCGGTGGGGGCCATCGGCCGCCTGCGGGGCCTGGAGCTGGACAACA CGGACATCGCGGACGCACTCCTGGCCATCCTGGCGCAGCGGCTGGCCCGCCGTGTCTGCGAGAAGTGCACGGAGCAGTAC GAGCCCACCGAGGAGCAGAAGGTGCTCTTTGGCTCCCTGCTGGAGGGCGTGCAGACGCGAAAGGGGCGGGGGTGCGCCCA CTGCCATCACACGGGCTATCGCAGCCGCATCGGTATTTTCGAGCTGCTCTTGGTGGACCCGAGCATGCAGGATCTCATCG TCTCGGGAGCCCACAACGCACAGATCCGCAAGTACGCGCGGGAGCACTTCTTCAAGACCATGGTGGACGACGCCCTGGAG AAGATCGCCGCGGGGTTGACCACGTTGGATGAGCTGGTTCGCGTGGTGCCCTACCGGCACATCATCGCCACCCGTGATGA GCGTCAGGGCTGA Protein sequence : MPNGPDGFSELSQFQLDRNSLRLLPEPFCRRHLVVVLGKVEPENPNATVTVGMVRPDAVHVLQQIGDLLERPIQPVRLNR YEVESALQAGFGSGPRVLANLVIRPGPLSKSQPSAVELVNNILVMAVDKKSSDIHIECYPGDVDFRLRIDGILHQMYTDM DPETVHEVVSRIKILAELDITERRKPQDGRIRAVIDRGEEDRKVIDYRVSVVPSPTGEDVVIRILDSDAGLVPVSKLGMN AEMQRIFLQLLVNPEGLVLVTGPTGSGKTTTLYSALAQLNDGRRKIITAEDPIEYFVPKVNQKQVSPQMPYASLLRALLR QDPNVLLVGEIRDLETGSTALNAARTGHLVLGTLHTADAVGAIGRLRGLELDNTDIADALLAILAQRLARRVCEKCTEQY EPTEEQKVLFGSLLEGVQTRKGRGCAHCHHTGYRSRIGIFELLLVDPSMQDLIVSGAHNAQIRKYAREHFFKTMVDDALE KIAAGLTTLDELVRVVPYRHIIATRDERQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-66 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-66 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STAUR_6527 | YP_003956111.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-63 | 43 |
| STAUR_6527 | YP_003956111.1 | general secretion pathway protein E | VFG1876 | Protein | 6e-64 | 42 |
| STAUR_6527 | YP_003956111.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-65 | 42 |
