Gene Information

Name : hsfA (STAUR_6071)
Accession : YP_003955657.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator HsfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7463978 - 7465432 bp
Length : 1455 bp
Strand : -
Note : -

DNA sequence : 
GTGAACCAGCCTAAACGCGCCAAGATCCTCGTGGTGGACGATGACCCCGTAGTCCTCAAGGCCGTCACCTCGATTCTCCA
GCGCGAGGGTTACCCCATCGTCGCCATCGACGATGCGGTCGAGGGACTGACGGCGGCCAAGGATCCGTCCATCGACGTGG
CCGTGTTGGACATCAACATGCCCCACCTGTCCGGCATGGACCTGCTCAAGGCCATCAAGGCCGAGCGGCCGGACGTGGAG
GTCATCATGATGACCGCCTATGCCACGGTGGAGACCGCCGTGGAGGCGGTGAAGGCCGGGGCGTATGACTACCTCACCAA
GCCGTTCGAGGACATCGACGACCTGAGTCTGACCGTCGGCAAGGCGGCCGAGCGCAAGGCGCTCAAGGACCGGACGCGGG
CCCTGGAGGAGGCGCTCACCGCGCGCAGCCAGTTCGAGGATCTCATCGGCCAGTCCTCGCAGATGCGCGCCGTCTTCAAG
CTGGTGGAGACGGTGAGCCACTCCACCGCCACGGTGCTCATCCAGGGCGAGAGTGGCACGGGCAAGGAGCTGGTGGCCCG
GGCCATCCACTACCGCAGCGCGCGCAAGGACAAGCCCTTCGTGGCGGTCAATTGTTCGGCCCTCACGGAGACGCTGCTGG
AGAGCGAGCTGTTCGGCCACATGAAGGGGGCCTTCACGGGCGCCACCGGCAACAAGAAGGGCCTCTTCGAGGCGGCCGAT
GGCGGCACCATCTTCCTGGACGAGATTGGCGATGTGCCGCCCGCCACCCAGGTGCGCCTGTTGCGCGTGCTGCAGGAGGG
CGAGGTGAAGCGGGTGGGCGCCAACGAGCCGGTGAAGGTGGACGTGCGGGTGATTGCCGCCACCCACGTGGATCTGACGC
GCGCCAAGGAGCAGGGCCGGTTCCGCGAGGACCTCTTCTATCGCCTCAACGTCATCACCATCGATCTGCCGCCGCTCCGG
GACCGGCCGGAGGATGTGCCGCTCCTGGCGCACCACTTCCTGAAGCTGTACTCGGCCAAGCTGGACAAGAAGGTGGCGGG
CTTCACCCCCCGCGCGATGGAGGCGCTCACCGTGAACCGGTGGACGGGCAACGTGCGCGAGCTGGAGAACGTCATCGAGC
GCGCCGTGGTGCTCACCTCCAACGAGGTGTTGGACGTGGAGGACTTGCCCCCGGGCTTCCAGGAGGCCCCGCAGGCTGGC
TCGCCCGTGGAGGTGTTCAGCCTGGCGCACCTGCCGTACGCCCAGGCCAAGCGGCTGGCCATGCGGGCGTTCGAGCGGCG
GTACCTCACCGCGCTGCTGGAGAAGAACAACAACAACGTCTCCAGCGCCGCCCGCGCCGCGGGGGTGGACCGCTCCAACT
TCCGCCGCCTGCTCAAGCAGTACGAGGTGGCTGGGCGCACCATGAAGCAGCGCAAGGCGGATGGGAACGACAGCTCTCCA
TTAGAGGTGGCCTGA

Protein sequence : 
MNQPKRAKILVVDDDPVVLKAVTSILQREGYPIVAIDDAVEGLTAAKDPSIDVAVLDINMPHLSGMDLLKAIKAERPDVE
VIMMTAYATVETAVEAVKAGAYDYLTKPFEDIDDLSLTVGKAAERKALKDRTRALEEALTARSQFEDLIGQSSQMRAVFK
LVETVSHSTATVLIQGESGTGKELVARAIHYRSARKDKPFVAVNCSALTETLLESELFGHMKGAFTGATGNKKGLFEAAD
GGTIFLDEIGDVPPATQVRLLRVLQEGEVKRVGANEPVKVDVRVIAATHVDLTRAKEQGRFREDLFYRLNVITIDLPPLR
DRPEDVPLLAHHFLKLYSAKLDKKVAGFTPRAMEALTVNRWTGNVRELENVIERAVVLTSNEVLDVEDLPPGFQEAPQAG
SPVEVFSLAHLPYAQAKRLAMRAFERRYLTALLEKNNNNVSSAARAAGVDRSNFRRLLKQYEVAGRTMKQRKADGNDSSP
LEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-50 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hsfA YP_003955657.1 DNA-binding response regulator HsfA BAC0467 Protein 2e-74 50
hsfA YP_003955657.1 DNA-binding response regulator HsfA BAC0089 Protein 6e-91 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hsfA YP_003955657.1 DNA-binding response regulator HsfA VFG0116 Protein 3e-61 44
hsfA YP_003955657.1 DNA-binding response regulator HsfA VFG1214 Protein 5e-59 43
hsfA YP_003955657.1 DNA-binding response regulator HsfA VFG1249 Protein 2e-60 43