Gene Information

Name : STAUR_6024 (STAUR_6024)
Accession : YP_003955611.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7401738 - 7402418 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCACCCGCGTCCTCCTCATCGACGACGACACCCGGATGTACGAGCTGCTCGCGCAATACCTGGGGCAGAACGGCAT
CTCGGTGGCCCACGCGCCCGATGGGGGACGGGGCCTGGCGGCGCTGGAGGGCAGCCCCTACGACGCGGTGCTGCTGGACG
TGATGATGCCGGGCATGGACGGCCTGGAGGTGTGCAAGCGCATCCGGGCCAAGACCCAGGTGCCCATCCTCATGCTCACG
GCCCGCGGCGATGAGACGGACCGCGTGGTGGGCCTGGAGCTGGGCGCGGACGACTACCTCGCCAAGCCCTTCAGTCCCCG
CGAGTTGCTGGCCCGCCTGCGGGCCGTGCTCCGGCGCGCCCAGCCCACCGCGGTGGCGGACCGGATGGAGGCCCAGGGCG
TCTCCATCGACGTGGCGGGGCGGGAGGTGAAGGTCAACGGGCGGCCCGTGGAGCTCACCGGGCTCGAGTTCGAGCTGCTC
GTGGCCCTCGTGCGGCGCGCGGGCCGCGTCATCCCCCGCGATGCCCTCCTGGGAGAGGCCGGCCGCAGCGACACCGTGGT
CGGTGAGCGCACCGTGGATGTCCACATCTCTCACTTGCGTCAGAAGCTTGGAGACGAGGGAGGGCGGCTCATCAAGACCG
TGCGCGGGGTCGGCTACGTCTTCGCCAAAGAGGGCGGGTGA

Protein sequence : 
MPTRVLLIDDDTRMYELLAQYLGQNGISVAHAPDGGRGLAALEGSPYDAVLLDVMMPGMDGLEVCKRIRAKTQVPILMLT
ARGDETDRVVGLELGADDYLAKPFSPRELLARLRAVLRRAQPTAVADRMEAQGVSIDVAGREVKVNGRPVELTGLEFELL
VALVRRAGRVIPRDALLGEAGRSDTVVGERTVDVHISHLRQKLGDEGGRLIKTVRGVGYVFAKEGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 3e-36 48
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP000675.2.gene1535. Protein 1e-40 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 4e-36 47
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP001485.1.gene721.p Protein 3e-33 45
STAUR_6024 YP_003955611.1 DNA-binding response regulator BAC0125 Protein 1e-32 45
STAUR_6024 YP_003955611.1 DNA-binding response regulator AE000516.2.gene3505. Protein 1e-34 45
STAUR_6024 YP_003955611.1 DNA-binding response regulator AE016830.1.gene1681. Protein 5e-37 44
STAUR_6024 YP_003955611.1 DNA-binding response regulator BAC0533 Protein 2e-27 44
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP000647.1.gene4257. Protein 2e-27 44
STAUR_6024 YP_003955611.1 DNA-binding response regulator HE999704.1.gene2815. Protein 2e-31 44
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP000034.1.gene3834. Protein 4e-27 43
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP001138.1.gene4273. Protein 5e-27 43
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_002695.1.915041.p Protein 4e-27 43
STAUR_6024 YP_003955611.1 DNA-binding response regulator CP001918.1.gene5135. Protein 3e-24 43
STAUR_6024 YP_003955611.1 DNA-binding response regulator NC_012469.1.7686381. Protein 2e-34 41
STAUR_6024 YP_003955611.1 DNA-binding response regulator BAC0197 Protein 8e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_6024 YP_003955611.1 DNA-binding response regulator VFG1390 Protein 4e-30 45
STAUR_6024 YP_003955611.1 DNA-binding response regulator VFG1389 Protein 5e-23 41