Gene Information

Name : STAUR_5903 (STAUR_5903)
Accession : YP_003955491.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7270222 - 7270944 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCCCCGTCTGGCTCCCCCGGCCGCCTCCGTGGGAGAATGGCTTGCGCATTTTGCTGATCGAGGACGACGCGCAGAC
GGCGGAGTATGTGCGCCGGGGCCTGACCGAGCTCGGGCAGCTCGTCGACCATGCCCAGGACGGCCAGGAAGGCCTGCTCA
TGGCGACAGGCGGCCACTACGACGTGCTGGTCATCGACCGGATGCTGCCGAAGCTCGATGGGCTGACCCTGCTGCGGATG
CTGCGCGAGGCGCACATCCGGACGCCCACGCTGTTTCTCACCGCCATGGGCAGCATCGATGACCGGGTGAAGGGGCTGGA
ATCCGGCGGGGACGATTACCTGGTGAAGCCCTTTGCCTTCTCCGAGTTGTACGCCCGCATCTGCTCATTGGGACGCCGCC
CTCCCCTTCAAGACGTCCAGACGGTCTTCACGCTCGCCGATCTGGAGATGGATCTCATCAAGCGGACGGTGACGCGCTCC
GGGAAGACCCTCGACTTGCAGCCCACGGAGTTCCGGCTGCTGGAATACCTGCTGCGCCATGCCGGGCGGGCCGTCACGCG
CACGATGCTGCTGGAGCACGTCTGGAACTTCCATTTCGATCCGAAGACCAACATCGTCGAGACGCACATCAGCCGCCTGC
GGGCCAAGCTGGACCGTGGCTTCACCCCGGAGCTGATCCACACGGTCCGTGGGGTGGGATACAAAATCGATGTGGCGTCC
TAG

Protein sequence : 
MAPVWLPRPPPWENGLRILLIEDDAQTAEYVRRGLTELGQLVDHAQDGQEGLLMATGGHYDVLVIDRMLPKLDGLTLLRM
LREAHIRTPTLFLTAMGSIDDRVKGLESGGDDYLVKPFAFSELYARICSLGRRPPLQDVQTVFTLADLEMDLIKRTVTRS
GKTLDLQPTEFRLLEYLLRHAGRAVTRTMLLEHVWNFHFDPKTNIVETHISRLRAKLDRGFTPELIHTVRGVGYKIDVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-44 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-45 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_5903 YP_003955491.1 two-component response regulator BAC0111 Protein 9e-54 48
STAUR_5903 YP_003955491.1 two-component response regulator BAC0197 Protein 8e-47 48
STAUR_5903 YP_003955491.1 two-component response regulator BAC0308 Protein 1e-46 47
STAUR_5903 YP_003955491.1 two-component response regulator BAC0638 Protein 6e-42 47
STAUR_5903 YP_003955491.1 two-component response regulator BAC0083 Protein 5e-47 46
STAUR_5903 YP_003955491.1 two-component response regulator BAC0125 Protein 4e-45 46
STAUR_5903 YP_003955491.1 two-component response regulator BAC0347 Protein 9e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_5903 YP_003955491.1 two-component response regulator VFG0596 Protein 4e-45 48
STAUR_5903 YP_003955491.1 two-component response regulator VFG1390 Protein 2e-37 44
STAUR_5903 YP_003955491.1 two-component response regulator VFG1389 Protein 3e-30 43