Gene Information

Name : tpx (STAUR_5707)
Accession : YP_003955296.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.-
Position : 7044327 - 7044875 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence :
ATGCACTGCCTGAAACCGCTACATGGGCGCTTCCTCATCTCTCAAGGAGACGCGCGCATGGCCAAGATCACCCTGAAGGG
CAACCCGGTTCAGACCGAAGGCAACCTCCCTCCCGTGGGGAGCCCGGCACCCGATGCCTCGCTCACCGGAATCGATCTTT
CCGACAAGAAGCTCTCCTCGATTCCGGGCAAGCGCGTGCTCAACATCTTCCCGAGCATCGACACCGGTGTCTGCGCGACC
TCGGTGCGCACGTTCAACAAGCGCGCGACCGAGAAGCCCGGCGTCACGGTGATCAACGTCTCGATGGACCTGCCGTTCGC
GCTCAAGCGCTTCTGTGGCGCTGAGGGCATCGACAAAGCGCTGACCCTCTCAGGCTTCCGCAGCGACTTCGGCAAGCAGT
ACGGCGTGACCATCCAGGAGGGAGGCCTGACGGGCCTCTACTCCCGCGCGGTCGTCGTGCTCGACGAAGGCGGCAAGGTC
CTCTACTCCGAGCAGGTCCCTGAAATCGGCCAGGAGCCGAACTACGACGCGGCCCTCGCGAAACTGTAG

Protein sequence :
MHCLKPLHGRFLISQGDARMAKITLKGNPVQTEGNLPPVGSPAPDASLTGIDLSDKKLSSIPGKRVLNIFPSIDTGVCAT
SVRTFNKRATEKPGVTVINVSMDLPFALKRFCGAEGIDKALTLSGFRSDFGKQYGVTIQEGGLTGLYSRAVVVLDEGGKV
LYSEQVPEIGQEPNYDAALAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-25 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-25 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-25 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003955296.1 thiol peroxidase VFG0087 Protein 8e-26 42