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Name : lysS (STAUR_5581) Accession : YP_003955173.1 Strain : Stigmatella aurantiaca DW4/3-1 Genome accession: NC_014623 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 6898999 - 6900549 bp Length : 1551 bp Strand : - Note : - DNA sequence : ATGGCTGACTCTGAGAACAAGACCGACAAGGTGGGTGAGGCGGACCTCGGGTCCAAGGAGCAGGAGATCTACCAGCAGCG CCTGGACAAGGCGGGCAAGTGGCGCGAGGCGGGCTTCAACCCGTACGGCAATGGCTACCGCGCCGAGCACCTGGCCGCCG ATATCCACGCGAAGCACGCCAGCCAGTCCCCGGAGGAGCTGGAGAAGGACGCTCCCACCTACACGGTGGCGGGCCGCATC GTGGCGATGCGCACCTTCGGCAAGGCCGCCTTCATCAAGCTGAGGGATCGCTCGGGCGAGATCCAGGTCCACATGAAGAA GGACGCGCTCGGGGACAGCTACGAGGCCTTCAAGCTGTGCGATCTGGGCGACTTCCTGGGGGCCACGGGGCCGGTGTTCC GCACCAAGACGGGCGAGCTATCGCTGTCGGCCACGAAGTTCACGCCGCTCACCAAGTCCCTGCGGCCCCTGCCGGAGAAG TGGCACGGGCTGACGGACGTGGAGATCCGCTACCGCCAGCGCTACCTGGACCTCGTCTCCAACCCGGAGGTGAAGCAGAC CTTCCTCAAGCGCAACAAGCTGGTGCGCTTCATCCGCGAGTTCCTGGACAGCCGGGACTACATCGAGGTGGAGACCCCGA TGATGCACCCGCTGGTGTCCGGCGCGGCGGCGCGGCCCTTCAAGACCCACCACAATGCGCTCGATATCGAGCTGTACATG CGCATTGCCCCCGAGCTGTACCTCAAGCGGCTGGTGGTGGGCGGCATCGAGCGCGTCTACGAGATCAACCGCAACTTCCG CAACGAGGGCATCAGCACCCGGCACAACCCGGAGTTCACGATGCTGGAGTTCTATCAGGCGTACGCCACGTACGAGGACC TGATGGACCTGACCGAGCAGATGATCTCCGAGGCGGCGCAGGCCGTCACCGGCGCCACGAAGGTGCCGTACCAGGGGCAC GAGCTGGACTTCGGCAAGGGTTGGAAGCGCATCCCCATGACCGAAGCCATCCGCGAGGCGGTGGGCGGGGCGCTGTCCGA CAAGGACATGGCAGACCCGGACAAGCTGCGGCACGAACTGCTCAAGACGAGTCACGGTGAGGCCGAGCGGCGCGCCATCG AGACGATGAACCAGGGGGAGCTGGTGGGGGCGCTCTTCGAGGCGCACGTGGAGCAGAAGCTCATCCATCCCACCTTCATC ACCCACTTCCCGACCTCGGTGAGCCCGCTGGCCCGCCGCAACGACCAGAACCCGGAAATCACGGATCGGTTCGAATTGTT CGTGGCCGGCCGGGAGATCGCCAACGCCTTCTCCGAGCTGAACGATCCCCTGGACCAGAAGGGCCGCTTCCTGGGGCAGC TCGAGGCGAAGCAGCGGGGCCAGCAGGAGACGATGGACTACGACGAGGACTACATCCGGGCGCTCGAGCACGGTATGCCG CCCACGGCCGGTGAGGGCATCGGGATTGATCGGCTCACGATGCTGTTCACGGATGCGCCATCGATCCGCGACGTCATCCT CTTCCCGCTCCTCAAGCCTCAGTCCAGGTAA Protein sequence : MADSENKTDKVGEADLGSKEQEIYQQRLDKAGKWREAGFNPYGNGYRAEHLAADIHAKHASQSPEELEKDAPTYTVAGRI VAMRTFGKAAFIKLRDRSGEIQVHMKKDALGDSYEAFKLCDLGDFLGATGPVFRTKTGELSLSATKFTPLTKSLRPLPEK WHGLTDVEIRYRQRYLDLVSNPEVKQTFLKRNKLVRFIREFLDSRDYIEVETPMMHPLVSGAAARPFKTHHNALDIELYM RIAPELYLKRLVVGGIERVYEINRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGATKVPYQGH ELDFGKGWKRIPMTEAIREAVGGALSDKDMADPDKLRHELLKTSHGEAERRAIETMNQGELVGALFEAHVEQKLIHPTFI THFPTSVSPLARRNDQNPEITDRFELFVAGREIANAFSELNDPLDQKGRFLGQLEAKQRGQQETMDYDEDYIRALEHGMP PTAGEGIGIDRLTMLFTDAPSIRDVILFPLLKPQSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-109 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003955173.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-109 | 48 |
