Gene Information

Name : STAUR_5503 (STAUR_5503)
Accession : YP_003955100.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Unknown
Product : transposase, is66 orf2-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6805944 - 6806288 bp
Length : 345 bp
Strand : +
Note : -

DNA sequence :
ATGCTGAGACTGCCGGAGGGGGTGAAAATCTGGGTGGCGACGGCGCCGTGCGACATGAGAAAGCAGGCCGACGGGTTGAG
CGCACTGGTGGAGGGAAGCTTGGGCCAGGCGCCGAAGTCTGGCCACCTGTTTGTCTTCTTCTCGCGAAGGAGAGATTTCG
TGAGGATTCTGTTCTGGGAGACGAATGGATATTGCACGGTGAGCAAGAGACTGGAGGCAGGACGCTTCCGGGTGCCTGAG
CCGGTAGAAGGCCAGGGAGCGGTGCACCTGGAGGCGAGGCAACTGGCCGAAGTGCTGGCCCTGGTAGAGACAGGCAGCGG
GGTGCGCCAGAGGCCGGTGCATTGA

Protein sequence :
MLRLPEGVKIWVATAPCDMRKQADGLSALVEGSLGQAPKSGHLFVFFSRRRDFVRILFWETNGYCTVSKRLEAGRFRVPE
PVEGQGAVHLEARQLAEVLALVETGSGVRQRPVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 9e-09 44
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 5e-09 44
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 5e-09 44
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-10 43
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 7e-10 43
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 3e-07 43
unnamed AAL08461.1 unknown Not tested SRL Protein 7e-10 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-09 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-09 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-09 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-09 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-09 42
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-09 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-09 42
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-09 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-09 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-09 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-09 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-09 42
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-09 42
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-07 41
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-07 41
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-08 41
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG1517 Protein 4e-09 44
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG1052 Protein 3e-10 42
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG0792 Protein 5e-10 42
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG1698 Protein 3e-10 42
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG1709 Protein 5e-10 42
STAUR_5503 YP_003955100.1 transposase, is66 orf2-like protein VFG1665 Protein 8e-10 42