Gene Information

Name : STAUR_3596 (STAUR_3596)
Accession : YP_003953213.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-amp ligase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.58
Position : 4337290 - 4338924 bp
Length : 1635 bp
Strand : -
Note : -

DNA sequence : 
GTGACCACTCCCAGCCCTCAGCGGGAGCCCACCCTTCTTCCGGGCTGCACGCCCTGGCCCGAGGAGTTCGCCGCGCGCTA
CCGCCAGGCGGGCTACTGGCGTGGCGAGACCTTCGGCCAGATGCTGCGCGAGCGCGCCCAGCGCCACGGCGACCGGACGG
CCCTGGTGGCCGGGACGCAGCGCTGGAGCTACCGCGAGTTCGACGAGCGGACCGACCGGTTGGTGGCGGGCTTCCACGCC
CTGGGGATCAAGCCCAGGGACCGGGTGGTGGTGCAGCTGCCCAACATCGCCGAGTTCTTCGAGGTGGTCTTCGCGCTCTT
TCGCTTGGGGGCGTTGCCGGTCTTTGCGCTTCCCGCGCATCGCAGCGCCGAGATCAACTACTTCTGTGAGTTCACCGAGG
CGGTGGCCTACGTCATCCCCGACAAGCACTCGGGATTCGACTACCGCACGCTGGCCGAGAAGGTGCGCGGCGCAGTGCCA
AGCCTGCGTCATGTGATTGTCGTGGGCGAGGCGGGGCCGTTCACGCCCTTGAGCCAACTGTACGCTTCACCAGCGGCCGG
TCTGCCCGGGCCCGCCCCCAGTGATGTGGCCTTCTTTCAGCTCTCGGGAGGAAGCACCGGCGTTCCCAAACTCATCCCGA
GAACCCACGACGACTACATCTACAGCTTGCGCGGCAGCGTCGAGATCTGCGGGCTCGACGAGACGAGCGTGTACCTGTGC
GCCTTGCCCGCCGCGCACAACTTCCCGCTCAGCTCGCCGGGTGTCCTCGGCACCCTGTATGCCGGTGGAACCGCCGTGCT
GGCGCTGCACCCCAGCCCGGACCAGACATTCCCCTTGATCGAGCGCGAGCGGGTGACCCTCACCGCGCTGGTGCCCCCCC
TGGCGATGATCTGGCTGGATGCCGCCAAGGCCCGGCGGCATGACCTGTCCAGCTTGAAAGTGCTCCAGGTGGGTGGGGCC
CGGCTCAGCGCCGAGGCCGCCCAGAGGGTGCGCCCCACGCTGGGCTGCACACTGCAACAAGTCTATGGGATGGCCGAGGG
ACTGGTGAACTACACCCGGCTGGATGATCCCGAGGAGCTCATCGTCGCCACCCAGGGCAGACCGATCTCCCCTGATGACG
AAATCCGGATCATCGACGAGGACGGCCGGGATGTGGCCCCAGGCGAGACCGGCCAGCTTCTGACCCGCGGCCCCTACACC
ATCCGCGGCTACTACAACGCAGAGGCCCACAACGCCCGGGCATTCACCTCCGATGGCTTCTACTGCACCGGCGACCTGGT
CAGGGTCACCCCAGAAGGCTACATGGTAGTGGAGGGGCGGGCGAAGGATCAGATCAACCGTGGCGGGGACAAGATCGCCG
CCGAAGAGGTCGAGAACCACCTGCTCGCGCACCCGTCGGTCCATGACGCAGCGGTGATCTCCATTCCGGATCCCTTCCTG
GGCGAGCGCACCTGCGCGTTCGTCATTCCACGCGAAGCCCCGCCCACCGCCGCGACGCTCACCTCGTTTCTGAGGGAGCG
TGGACTGGCGGCCTACAAGATTCCGGACCGTGTCGAGTTTGTCACCACGTTCCCACAGACCGGCGTCGGCAAGGTCAGCA
AGAAGGCCCTGCGCGAGACCCTCACCCGCCGCTAA

Protein sequence : 
MTTPSPQREPTLLPGCTPWPEEFAARYRQAGYWRGETFGQMLRERAQRHGDRTALVAGTQRWSYREFDERTDRLVAGFHA
LGIKPRDRVVVQLPNIAEFFEVVFALFRLGALPVFALPAHRSAEINYFCEFTEAVAYVIPDKHSGFDYRTLAEKVRGAVP
SLRHVIVVGEAGPFTPLSQLYASPAAGLPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVEICGLDETSVYLC
ALPAAHNFPLSSPGVLGTLYAGGTAVLALHPSPDQTFPLIERERVTLTALVPPLAMIWLDAAKARRHDLSSLKVLQVGGA
RLSAEAAQRVRPTLGCTLQQVYGMAEGLVNYTRLDDPEELIVATQGRPISPDDEIRIIDEDGRDVAPGETGQLLTRGPYT
IRGYYNAEAHNARAFTSDGFYCTGDLVRVTPEGYMVVEGRAKDQINRGGDKIAAEEVENHLLAHPSVHDAAVISIPDPFL
GERTCAFVIPREAPPTAATLTSFLRERGLAAYKIPDRVEFVTTFPQTGVGKVSKKALRETLTRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE CAA21394.1 - Virulence HPI Protein 8e-108 51
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 6e-108 51
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 1e-107 51
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 8e-108 51
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 8e-108 51
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 8e-108 51
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 8e-108 51
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 5e-107 50
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 7e-107 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_3596 YP_003953213.1 2,3-dihydroxybenzoate-amp ligase VFG0168 Protein 1e-139 56
STAUR_3596 YP_003953213.1 2,3-dihydroxybenzoate-amp ligase VFG0932 Protein 5e-116 49
STAUR_3596 YP_003953213.1 2,3-dihydroxybenzoate-amp ligase VFG1817 Protein 5e-108 49