|
Name : serS (STAUR_2708) Accession : YP_003952333.1 Strain : Stigmatella aurantiaca DW4/3-1 Genome accession: NC_014623 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 3286755 - 3288035 bp Length : 1281 bp Strand : - Note : - DNA sequence : ATGCTGGATCTCCGATACGTCGCGCAGAACTTCGATGCGGTTGTTGCCCGGCTGAAGGCCCGGAGCGGCAACCTGGACCT CGGTCCCTTCCAGAAGCTCTTCACCGAGCGGCGGGAGCTCTACGTCTCCGTGGAGGGGTTGTCGGCACGCCGCAACGCCG CCAACGACGAGATGAAGCGCAAGGCGAAGGAGGACCCGAAGGCGCTGGACGCGCTGCGCGGGGACCTGCGCGCCGTCTCC CAGGAGATCAAGGAGAAGGAGGCACGCCTCAAGGAGGTGGAGGAGGAGATCAGCCGCATCCTGCTGCTCATCCCCAACAT CCCCCACGAGTCGGTCCCCACCGGCGCGAGCGAGCAGGACAACGTCGTGACCCGGACCTGGGGGGAGAAGCCCGATTTCC TCTTCACGCCCCGGCAGCACTTCGAGATTGGCGAAAAGCTGGGGATGCTGGACTTCGAGCGCGCCGCCAAGGTGTCCGGC AGCCGGTTCACCTTCTACAAGGCGGCCCTGGCCCGGCTGGAGCGGGCGCTCGTCACCTTCATGATCGATGTGCACACCCA GAAGGGCTACACGGAGCTGCTGCCGCCCTACCTGGTGCTGCGCGAGACGATGATGGGCACCGGCCAGCTGCCGAAGTTCG AGGACGACGCCTTCAAGACGTCGGGCGACCCCGAGCGCTTCCTCATCCCCACCGCCGAGGTGCCCGTCACCAACTACCAC TCGGATGAAATCCTGGAGGGCGGCCAGCTGCCCCTGAAGTACTGCGCCTTCAGCCCGTGCTTCCGGGCCGAGGCGGGCGC GGCCGGCCGGGACACGCGCGGCCTGATTCGCCAGCACCAGTTCCACAAGGTGGAGCTGGTGAAGTTCGCCACGCCGGAGA CCAGCCTGAGCGAGCTGGAGGGCATGACGGATGACGCGTGCGACATCCTGCGGCGCCTGGGGCTGCACCACCGGGTGATG CTGCTATGCACCGGGGACATGGGCTTCGCGGCCCGGAAGACGTTCGACATCGAGGTGTGGCTGCCGGGCCAGGGGGCCTA CCGGGAGATCTCTTCGTGCTCGGACTGCGGCGACTTCCAGGCGCGCCGGGCCAAGATTCGCTACCGCGCCCAGAAGGGGG ACAAGCCCCAGTTGCTGCACACCCTCAACGGCAGTGGCCTGGCCGTGGGGCGGACGAGCATCGCCATCCTCGAAAACTAC CAGCGCGAGGACGGCAGCGTGGCCATTCCGGACGCCCTGGTCCCCTATATGGGGGGACTCAAGGAGATCCGTCCGCTGTG A Protein sequence : MLDLRYVAQNFDAVVARLKARSGNLDLGPFQKLFTERRELYVSVEGLSARRNAANDEMKRKAKEDPKALDALRGDLRAVS QEIKEKEARLKEVEEEISRILLLIPNIPHESVPTGASEQDNVVTRTWGEKPDFLFTPRQHFEIGEKLGMLDFERAAKVSG SRFTFYKAALARLERALVTFMIDVHTQKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTSGDPERFLIPTAEVPVTNYH SDEILEGGQLPLKYCAFSPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFATPETSLSELEGMTDDACDILRRLGLHHRVM LLCTGDMGFAARKTFDIEVWLPGQGAYREISSCSDCGDFQARRAKIRYRAQKGDKPQLLHTLNGSGLAVGRTSIAILENY QREDGSVAIPDALVPYMGGLKEIRPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-107 | 54 |
