Gene Information

Name : PPSC2_c0090 (PPSC2_c0090)
Accession : YP_003944318.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxs
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 121992 - 122873 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACGGGAACTTCGCGTGTAAAAAGAGGTATGGCAGAGATGCAAAAAGGTGGCGTAATCATGGATGTCATGAACGC
TGAACAGGCTAAAATTGCAGAGGCAGCAGGCGCTACAGCCGTAATGGCTCTTGAACGAGTGCCTTCGGATATCCGTGCAG
CTGGTGGGGTTGCTCGTATGGCTGACCCTACGATTGTGGAAGAGGTTATGAAGGTTGTTTCTATTCCTGTTATGGCTAAG
GCTCGTATTGGTCACTTTGTTGAGGCAAAGGTACTCGAATCTCTCGGTGTTGACTATCTCGATGAGAGTGAAGTATTGAC
ACCTGCAGATGAGGTGTTCCATATCGATAAGCGGGAGTTCACCGTTCCATTTGTTTGTGGAGCCAAGGATCTAGGGGAAG
CATTGCGTCGTATCGGTGAAGGCGCATCTATGATCCGTACAAAGGGTGAGCCGGGAACTGGAAATATTGTTGAGGCTGTT
CGTCACATGCGGTTTATTAATGGTCAAATTCGCAAGGTGCAAAACCTGTCAAAGGACGAGCTGTATGCAGAAGCGAAAAA
CCTCGGAGTTGCTTATGAACTGCTGTTGGAAGTGCATGAGCTTGGTAAGCTACCAGTGGTCAACTTTGCAGCAGGCGGTG
TAGCAACACCTGCGGATGCTGCGTTGATGATGCATTTAGGCGCTGATGGTGTCTTTGTAGGCTCTGGTATCTTCAAGTCG
GACAGCCCTGAGAAATTTGCACGGGCAATTGTGGAAGCGACCACTCATTACACGGATTACAAGCTGATTGCAGAAGTGTC
CAAGAATTTGGGAACTCCTATGAAAGGCATTGAAATTTCCAAACTGGCATCGCATGAGCGCATGCAGGATCGTGGTTGGT
AA

Protein sequence : 
METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARMADPTIVEEVMKVVSIPVMAK
ARIGHFVEAKVLESLGVDYLDESEVLTPADEVFHIDKREFTVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAV
RHMRFINGQIRKVQNLSKDELYAEAKNLGVAYELLLEVHELGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DSPEKFARAIVEATTHYTDYKLIAEVSKNLGTPMKGIEISKLASHERMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-82 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-82 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-81 65