Gene Information

Name : PPSC2_c0870 (PPSC2_c0870)
Accession : YP_003945094.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : iron (III) dicitrate ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 965613 - 966590 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGCTGTGGATTTTACTCGTGTTAATGCTGGGTGTTTCCTTTGTAGCTATCGGCGTGGGTAGCACCTACATTAC
ACCCGCTGAGCTGATCGCCGCTCTGACTGACCGAAATGCCTCTTCCTGGTTCATCGTTCACCATTACCGACTGCCTCGTG
GCCTGCTGGCCATCATGGCCGGTGCTGGCCTTGCAGTAGCTGGCGTGCTGCTGCAAGGTATGATCCGCAACCCACTGGCT
TCGCCGGATGTGGTGGGTGTATCCAAGGGAGCCGGCTTTGCTGCGGTTCTCGTCATCGTGCTGCTCCCCTCATCCCCCGT
GGCGCTATTGCCTGTAGCTGCCTTTGTCGGTGCCGGATTAGCTGCACTACTGCTCGTACAGCTTTCGATGAAGGGGGGCA
TGCGTCCTAACATGCTAGCCTTAACCGGGCTGGCGGTAGGTGCTATTTTTCAGGCTGCAACCGATTATATTCTGGTCAAA
TATCCACTTGAAGCCAGCGATACGCTGACTTGGCTAGCTGGAAGTCTGTGGGGCAAAGGCTGGGATGAAGTATATGGACT
TTTGCCATGGTTAATTGTATTGCTGCCTCTAGCCTATACGCTACAGCGCAAGCTGGATATTATGAGTCTGGATGAGGAAA
GCTCCGCTGGCTTGGGACTTAGCGTGAAGCGTATGCGCACAGGATTGCTGGCCGTATCCGTGGCCTTAGCTGCTTCCTGT
GTCGCTGCCATCGGCTCCATCGGTTTTATAGGACTGCTGGCACCACATCTGGCGCGGCGTTTGTTTGGCAATCGCCACCG
CTATCTATTGCCCGGCGCAGCCATGATCGGTGCCCTGATTCTCGTCCTTGCCGATGCGCTCGGACGGGGGCTGAAGCCGC
CGCTCGAAATTCCTGCTGGCATCGTGACAGCCGTGATTGGCGCGCCCTATTTCCTGTATCTCTTGCTACGGGAACGCAAG
CAAAAAAGCAGCGGATAA

Protein sequence : 
MKKLWILLVLMLGVSFVAIGVGSTYITPAELIAALTDRNASSWFIVHHYRLPRGLLAIMAGAGLAVAGVLLQGMIRNPLA
SPDVVGVSKGAGFAAVLVIVLLPSSPVALLPVAAFVGAGLAALLLVQLSMKGGMRPNMLALTGLAVGAIFQAATDYILVK
YPLEASDTLTWLAGSLWGKGWDEVYGLLPWLIVLLPLAYTLQRKLDIMSLDEESSAGLGLSVKRMRTGLLAVSVALAASC
VAAIGSIGFIGLLAPHLARRLFGNRHRYLLPGAAMIGALILVLADALGRGLKPPLEIPAGIVTAVIGAPYFLYLLLRERK
QKSSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 7e-26 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0870 YP_003945094.1 iron (III) dicitrate ABC transporter permease BAC0163 Protein 4e-26 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0870 YP_003945094.1 iron (III) dicitrate ABC transporter permease VFG1043 Protein 4e-26 48