Gene Information

Name : PPSC2_c0842 (PPSC2_c0842)
Accession : YP_003945066.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : DNA topoisomerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 941431 - 943566 bp
Length : 2136 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGTATTGGTATTGGCAGAAAAACCATCCGTGGCCAGAGAGATTGCACGTGTGATGGGCAGCCGAGAGAAGCATAA
AAGTTATATAGAAGGACCTAAGTATGTAGTGACATGGGCTTTGGGTCATTTGGTCGGATTAGCAGAGCCTGAGGATTACG
ATTCTAAGTATGCGACTTGGAACTTGGAGGACTTGCCCATTCTTCCGAAGAACTCCAAGTTAAAGGTATTGCGGGAAAGT
AATCATCAGTTCAAAGCTGTACAGCAGCTTATGAAACGACAGGACATTGGAGAACTTATCGTAGCAACAGATGCTGCTCG
TGAAGGAGAACTGCTGGCACGATGGATTATACAAATGGCAAACTGGAAAAAGCCTTTCCGACGCTTATGGATTTCCTCGC
AGACGGATAAGGCAATTAAGGCAGGTTTCGCGAAATTATTGCCTGGCCAGCAGTTTGATCGTTTATATGAATCGGCTCGC
TGTAGGGCTGAAGCAGACTGGATGATTGGTCTCAATGTAACCCGCGCGTTAACGGTTCGTTATAACGCTCAGCTTTCGGC
TGGAAGGGTACAGACACCGACACTGGGGATGATTATGGAACGTGAGAAAGAGATCACCCAGTTTCGTTCTCAGGAATATG
ATACTTTGACGGCTGATTTTGGCCATTTTCAGGCAACATGGCGGGCAGAAAATGGGGATTCACGTATGTTTGACCGTACT
CAGGCAGAGACTTTGCGCCACAGGCTTGAGGGGGCCAAAGGTACAGTTGTGAGTGTTAAAAAGAGTGAAAAAAACGAGCC
TCACCCGCTGGCGTATGACTTAACTGAGCTGCAACGAGATGCTAACCAGCGCTACGGCTTCTCAGCCAAACAGACGTCCA
ATGTCCTTCAGCGTCTGTATGAGCAGCATAAGCTGGTGACCTATCCGCGTACAGATAGCCGTTATCTTACATCCGATATG
GTGGATTCACTTAAGGAAAGGCTCAGTAGCGTAGCAGTAGGTCCGTATGCTTCTTTAGCACGTCCGTTATTGCGTAACAA
ATTGCCAATCACAAAGCGAGTTGTGGATGATAGTAAAGTCACAGATCACCATGCGATTATACCTACTGAGCAGACATTAT
TGCTTAATCAGTTAAGCCCAGAGGAACGTAAGCTGTATGATCTGATTGCACGCCGTTTTATCAGTTTGTTCTACCCACCT
GCACGTTATGATGCTGTAGCTGTATCGGTCATGGTGGGGCAGGAAACATTTCAGGTAAAAGGTACAACCATAAAAGATAG
TGGTTGGCGTGCTGTATATGACGAAAGTCATTATGAATTGGACGATGAAGAGATAGATGATCGTGAAAATAATGGACGGG
GCGTTATTTTGCCTGAGCTGAAAAAAGGAGACTCCGTCCAATTGCAGCGTTGTATTGTACGAGCTGGACGAACGATGCCG
CCGAAGCGTTATACAGAAGCAGCCCTGCTCGCTCAGATGGAAAAGCACGGCCTGGGTACACCAGCTACTCGTGCAGATCT
GATCGAGAAACTCGTCAGCTCGGATACGATAGAGCGCCAGGGGAACGTGATGCATCCAACTGGCAAAGGCAAGCAACTGA
TCGAATTGGCGGCTCCACAGCTACGAACGCCCGAATTGACGGCACGTTGGGAAGCGGAGTTGGAACGGATTGCCCGTGGT
CAAGGACAACCTGAGCCATTTTTGAATTCTATCCGTGCTATGGCGAAAGAATTGGTTTCTACTGTGAAAAATAGCAGCGC
GGAGTACAAACCCCATAACGTAACGAATAGCCATTGTCCGGATTGTGGTACAAAGTTGTTGGAGAAAAAAGGGAAGAAAG
GCAAGTTCCTTGTATGTCCAAGTGCGGATTGTGGTTACCGTCGTTCAGGGGAAAAACGCTTGTCCAATCGACGTTGTCCA
CAGTGTCATAAAAAAATGGAAATGAAAGAGGGCAAAGCAGGTCTGTATGTAAGATGCTTACCCTGCGGCATTACGGAGAC
GCTGGATAAGGACAAGCAACGGGTAAACAAACGGGAACAGCAAAAGCTAGTAAAACAGTTTGAAAAGAAGGATTCCTTTG
GCTCCAGTTTGGGGGATTTGTTAAAAGCAGCAATGGAGCAAAAGCAGGGCGAATAA

Protein sequence :
MKVLVLAEKPSVAREIARVMGSREKHKSYIEGPKYVVTWALGHLVGLAEPEDYDSKYATWNLEDLPILPKNSKLKVLRES
NHQFKAVQQLMKRQDIGELIVATDAAREGELLARWIIQMANWKKPFRRLWISSQTDKAIKAGFAKLLPGQQFDRLYESAR
CRAEADWMIGLNVTRALTVRYNAQLSAGRVQTPTLGMIMEREKEITQFRSQEYDTLTADFGHFQATWRAENGDSRMFDRT
QAETLRHRLEGAKGTVVSVKKSEKNEPHPLAYDLTELQRDANQRYGFSAKQTSNVLQRLYEQHKLVTYPRTDSRYLTSDM
VDSLKERLSSVAVGPYASLARPLLRNKLPITKRVVDDSKVTDHHAIIPTEQTLLLNQLSPEERKLYDLIARRFISLFYPP
ARYDAVAVSVMVGQETFQVKGTTIKDSGWRAVYDESHYELDDEEIDDRENNGRGVILPELKKGDSVQLQRCIVRAGRTMP
PKRYTEAALLAQMEKHGLGTPATRADLIEKLVSSDTIERQGNVMHPTGKGKQLIELAAPQLRTPELTARWEAELERIARG
QGQPEPFLNSIRAMAKELVSTVKNSSAEYKPHNVTNSHCPDCGTKLLEKKGKKGKFLVCPSADCGYRRSGEKRLSNRRCP
QCHKKMEMKEGKAGLYVRCLPCGITETLDKDKQRVNKREQQKLVKQFEKKDSFGSSLGDLLKAAMEQKQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00720 YP_008394244.1 DNA topoisomerase III Not tested Not named Protein 4e-105 42