Gene Information

Name : PPSC2_c0801 (PPSC2_c0801)
Accession : YP_003945025.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 892042 - 893856 bp
Length : 1815 bp
Strand : +
Note : -

DNA sequence :
ATGAAATCAATGGAAACCGAAGGAACAAAAGAAACAGGAGTGAAATCAACAGCAGTAGAGAAGACAAGTACGGAGCAAGC
CAGTAGGGTTAATTCTTTCCCAGGGAGCCGCAAGGTGTATATTCAAGGTTCTCGGCCGGACATTGCCGTGCCAGAGCGTG
AAATCGCACTGCATCCCACACATACGCCGCAGGGAATAGAGTATCATGAGCCACTGCGTGTGTACGATACCAGCGGTCCG
ATGACAGATGAAGCCTATCAGGTGGATATTCGTCAGGGCTTGCCACCATTACGGCGAGCTTGGGCACTGGAACGGGGGGA
TGTGGAGGCTTACGACGGCCGCGCCGTCAAGCCGGAGGATAATGGACTGAAACCCGGCTCCAAACGGGAAACAGTGGAAT
TTCCCGGCGTGACCAACCGTCCGCTACGGGCTTCACAAGGACGCACTGTGACGCAAATGCATTATGCGCGGCAAGGGATC
ATTACGCCTGAAATGGAATTTGCGGCGATCCGTGAAGGAGTGGAGCCCGAGTTTGTGCGGCAGGAGTTAGCGGCTGGACG
AGCCATTTTACCTTCAAATATCAATCACCCGGAAAGCGAGCCCATGGTCATAGGGCGCCATTTTCACGTGAAGATCAATG
CAAACATTGGAAATTCCGCGGTTACGTCCTCCATCGAGGAGGAAGTGGAGAAGATGACCTGGGCTGTACGCTGGGGCTCA
GACACCGTCATGGACCTGTCCACAGGTCGTAATATCCATACGACACGCGAATGGATTATTAGGAATTCACCCGTACCGAT
TGGGACGGTGCCGCTATATCAGGCACTGGAAAAGGTGAACGGCGAAGCAGAGAAGCTAACGTGGGAGCTGTATCGAGACA
CACTGATTGAGCAGGCGGAGCAAGGAGTGGACTATTTTACAATTCATGCGGGAGTATTGCTGCGATATATACCGATGACG
GCGAATAGAATGACGGGAATTGTATCCCGGGGCGGGTCGATTATGGCAGCTTGGTGCCTTGCGCACCATCAGGAGAACTT
TTTGTATACGCATTTTGAAGAAATCTGTGAAATTATGAAAACCTACGATGTGGCCTTTTCTCTCGGGGATGGTCTGCGTC
CGGGTAGTATCTATGATGCGAATGATGAAGCACAATTTGCAGAGCTGGAGACGTTGGGCGAGCTAACGCAAATCGCATGG
AAGCATGATGTCCAGGTCATGATTGAAGGGCCGGGACATGTCCCTATGCACAAAATCAAGGAGAATGTGGATTTACAAAT
GGAAATTTGTAAGGAGGCTCCCTTTTATACTTTAGGGCCGCTGACGACGGATATCGCACCAGGATATGATCATATTACCT
CAGCTATCGGGGCGGCCATGATCGGTTGGTTCGGGACGTCCATGCTGTGCTATGTTACGCCGAAGGAGCACTTGGGTCTG
CCGAACAAGGATGATGTCCGCGAGGGAGTTATTACCTACAAAATTGCCGCACATGCTGCCGATCTGGCGAAGGGCCATCC
ACGTGCACAGCAGCGGGACGATGCTTTGTCCAAGGCGCGTTTTGAATTCCGCTGGCGCGATCAGTTCAATCTTTCGCTTG
ACCCTGAGCGGGCCTTGTCCTACCATGATGAAACACTACCGGCAGAGGGGGCCAAGGAAGCACACTTTTGCTCGATGTGC
GGTCCTAAGTTTTGCAGTATGCGTATCACACAGGACATTCGTGCCTATGCGGCAGATAAGGGACTGAATACCGAGGAAGC
CGTCGTCGCCGGGATGCGTGAGAAGGCAGAGCAGTATCGGGATGGCGAGCGATAA

Protein sequence :
MKSMETEGTKETGVKSTAVEKTSTEQASRVNSFPGSRKVYIQGSRPDIAVPEREIALHPTHTPQGIEYHEPLRVYDTSGP
MTDEAYQVDIRQGLPPLRRAWALERGDVEAYDGRAVKPEDNGLKPGSKRETVEFPGVTNRPLRASQGRTVTQMHYARQGI
ITPEMEFAAIREGVEPEFVRQELAAGRAILPSNINHPESEPMVIGRHFHVKINANIGNSAVTSSIEEEVEKMTWAVRWGS
DTVMDLSTGRNIHTTREWIIRNSPVPIGTVPLYQALEKVNGEAEKLTWELYRDTLIEQAEQGVDYFTIHAGVLLRYIPMT
ANRMTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMKTYDVAFSLGDGLRPGSIYDANDEAQFAELETLGELTQIAW
KHDVQVMIEGPGHVPMHKIKENVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTSMLCYVTPKEHLGL
PNKDDVREGVITYKIAAHAADLAKGHPRAQQRDDALSKARFEFRWRDQFNLSLDPERALSYHDETLPAEGAKEAHFCSMC
GPKFCSMRITQDIRAYAADKGLNTEEAVVAGMREKAEQYRDGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 70
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 70
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66