|
Name : PPSC2_c0076 (PPSC2_c0076) Accession : YP_003944304.1 Strain : Paenibacillus polymyxa SC2 Genome accession: NC_014622 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 76779 - 78305 bp Length : 1527 bp Strand : + Note : - DNA sequence : ATGTCGGATGAAACTACTAACCAGGAATTACAAGAAAATCGCGAGGAATTAAGTGAATTATTGCAAATTCGTCGTGCCAA ATTGGACGAGCTTCGCTCATTGGGCATTGATCCTTTTGGACGCAAATACATACGCACGGCTGAAGCGGGCGTACTACTGA GCAAGTATGACAGCTTGACCAAGGAAGAATTGGAAGAAAAGAATATTGAAGTTAGCATAGCAGGCCGCATTATGGCTAAA CGAGTTATGGGGAAAGCCAGTTTTGCTCATATACAGGATCTTAGCGGACGGATCCAAATTTATGTTCGTCAAGACACTGT ACCTGAAGCAAATTATAAAGCATTTGGTATTTTGGATCTCGGCGATATTGTTGGTGTTAAGGGTGTGCTCTTTAAAACCA AGACAGGCGAAACGACGATCAAAGTGTTGGATATTGAAGTTTTGTCCAAATCCTTGTACCCATTACCGGAGAAATACCAC GGTCTGAAGGATGTGGAATTGCGCTACCGTCAGCGTTATGTCGATCTAGTTATGAACCCAGAAGTACAAAAGACGTTCAT TACGCGGTCCCGTATTATTCAATCCATGCGTCGTTATCTGGATTCGCTCGGCTATTTGGAAGTTGAAACTCCAACGTTGC ATGCCATTGCTGGCGGGGCGGCGGCAAAGCCATTTGTTACGCACCATAATGCATTGGACACGCAGCTTTATATGCGTATT GCTATTGAACTTCATTTGAAACGACTAATTGTTGGCGGAATGGAGAAAGTATATGAGATCGGGCGTGTATACCGTAATGA AGGTGTTTCGACCCGTCATAACCCTGAGTTTACGTTGATTGAGCTGTATGAGGCGTATGCTGATTATAAAGATATCATGC AATTGACGGAAAACTTGATTGCACATATTGCGCAGGAAGTACTGGGCACACAGCACATTCAGTATCAAGGTCAGGAAGTG GATCTGACGCCGCAATGGCGCAGAGTTTCCATGGTCGATGCTGTTAAAGAAGTAACAGGTGTGGACTTTAGTGCGCAAAT GAGTAATGAAGAAGCTCATCGCCTTGCGAAAGAGCATAAGGTTCCGGTTGAACCGCACATGACATTTGGTCATATCCTGA ATGCATTCTTTGAGCATTTTGTAGAGGAAACGCTCATTCAGCCAACCTTTATTACAGGACATCCAGTTGAAATCTCGCCA TTGGCTAAGAAAAACGAACAGGACCCGCGTTTTACGGATCGCTTCGAGCTGTTTGTGGTCGCTCGCGAGCATGCGAATGC GTTCACTGAGCTGAATGATCCAATTGACCAGCGTCAACGTTTTGAAGCACAATTGCTGGAACGTGAGCATGGTAATGATG AGGCTCATCAAATGGATGATGACTTTATCCGCGCCTTGGAATACGGTATGCCGCCAACAGGCGGGCTGGGCATCGGCATC GATCGTTTGGTGATGTTGCTGACAGATGCACCTTCCATTCGCGATGTGCTGCTTTTCCCGCATATGCGTAACCGTACCGT AGAATAA Protein sequence : MSDETTNQELQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEELEEKNIEVSIAGRIMAK RVMGKASFAHIQDLSGRIQIYVRQDTVPEANYKAFGILDLGDIVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYH GLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAAKPFVTHHNALDTQLYMRI AIELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNPEFTLIELYEAYADYKDIMQLTENLIAHIAQEVLGTQHIQYQGQEV DLTPQWRRVSMVDAVKEVTGVDFSAQMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEHFVEETLIQPTFITGHPVEISP LAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREHGNDEAHQMDDDFIRALEYGMPPTGGLGIGI DRLVMLLTDAPSIRDVLLFPHMRNRTVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-122 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPSC2_c0076 | YP_003944304.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-123 | 49 |
