Gene Information

Name : PPSC2_c0695 (PPSC2_c0695)
Accession : YP_003944919.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : chemotaxis protein CheY
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 792275 - 792934 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
GTGGAGGATGAAATACGTATTCGTGAAGTGATTGCGGATTATTTTAAACAAAATAATTGGGAAGTCTATGAAGCAGGCAA
TGGAAAAGATGCACTCCTCTGGTTCGATTCGGTGCAACCGGAACTAATTATACTCGATATTATGATGCCTGAGCTGGATG
GCTGGGAAGTATGCCGTCAGGTACGCAGCCGTTCAGGGGTACCGATTATTTTGCTGACGGCCAAATCCGGTGATGATGAT
AAAATATTGGGCTTTGAGCTGGGGGCAGATGACTACGTGACCAAGCCTTTCAGTCCCAAGGTGCTGATTGCCCGCGCGAA
CGCACTGATGAAACGGGTGGAGGGGCATGTGCAGCCGGAGTCGCATATTTTGCGTTTTGGCAGTGCTATGCTCAACACGA
TGGCTCATCGGCTTGAGGTGGATCAGGCGGAAGTTGAATTGACGCCCAAGGAGTATGAGTTGCTGCGGCTGCTTATACAT
AATAAAGGCATCGTAGTTTCACGGGATGCGATACTGAACCGGGTGTGGGGTATCAATTTTGAAGGGGATACACGAGTTGT
CGATACGCATATCAAAAAGCTGAGAAGTAAGCTGGGCCGTGAATCACGCCATATTCGCACGGTTTTTGGCACAGGCTACA
GGTTCGAGGAGGAAGAATGA

Protein sequence : 
MEDEIRIREVIADYFKQNNWEVYEAGNGKDALLWFDSVQPELIILDIMMPELDGWEVCRQVRSRSGVPIILLTAKSGDDD
KILGFELGADDYVTKPFSPKVLIARANALMKRVEGHVQPESHILRFGSAMLNTMAHRLEVDQAEVELTPKEYELLRLLIH
NKGIVVSRDAILNRVWGINFEGDTRVVDTHIKKLRSKLGRESRHIRTVFGTGYRFEEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-27 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_003923.1003417.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_013450.8614146.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002951.3238224.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_007793.3914065.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002758.1121390.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_010079.5776364.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002952.2859858.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_007622.3794948.p0 Protein 7e-32 46
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_007793.3914279.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002745.1124361.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_009782.5559369.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002951.3237708.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_003923.1003749.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002758.1121668.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_009641.5332272.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_013450.8614421.p0 Protein 7e-35 44
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_002952.2859905.p0 Protein 1e-34 43
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_007622.3794472.p0 Protein 1e-34 43
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY NC_012469.1.7686381. Protein 8e-34 42
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY AE015929.1.gene1106. Protein 1e-27 42
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY BAC0197 Protein 3e-29 42
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY BAC0083 Protein 2e-31 41
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY HE999704.1.gene1528. Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0695 YP_003944919.1 chemotaxis protein CheY VFG0596 Protein 3e-27 42