Gene Information

Name : PPSC2_c4623 (PPSC2_c4623)
Accession : YP_003948812.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4842500 - 4843177 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCTATTGAAAACTCAGGCATTAAAGAAGCATTACGGTAATGGAGATACTGCTGTTCATGCCTTAGACAGCGTAAA
TCTGGAGGTGGAAAGCGGAGAATTTGTCGCTATTGTCGGTACATCCGGGAGCGGCAAATCTACCCTTCTGCATATGCTGG
GTGGACTTGATCGTCCAACAAGTGGAGACGTTACGATTGACGGCAAAGATATTTTTACATTGAAGGACGAAGAATTGACA
ATTTTTCGCAGACGAAAGATTGGCTTCGTGTTTCAAAATTACAACCTGGTGCCTGTCTTAAATGTCTACGAAAATATTGT
GCTTCCTATTGAACTGGACGGTAAAGAACCGGACAAAGCCCACGTAGATAAAATTGTACATACCTTGGGCCTTGACCACA
AAATGAATAATCTGCCAAACAATCTTTCCGGTGGACAACAGCAACGTGTAGCTATTGCCAGAGCACTGGCAGCCAAGCCC
GCCATTATCTTGGCAGATGAACCCACCGGAAATCTGGACAGTAAAACGAGTCTGGATGTGATGGGATTGATCAAAGTATC
CAGCCAACAGTTCGCCCAAACGATGGTGATGATTACTCATAATGAGGAAATCGCGCAGATGGCAGACCGCATCATCCGCA
TTGAGGACGGTAAAATAGTAGGTGGTGCGACCCGATGA

Protein sequence : 
MALLKTQALKKHYGNGDTAVHALDSVNLEVESGEFVAIVGTSGSGKSTLLHMLGGLDRPTSGDVTIDGKDIFTLKDEELT
IFRRRKIGFVFQNYNLVPVLNVYENIVLPIELDGKEPDKAHVDKIVHTLGLDHKMNNLPNNLSGGQQQRVAIARALAAKP
AIILADEPTGNLDSKTSLDVMGLIKVSSQQFAQTMVMITHNEEIAQMADRIIRIEDGKIVGGATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c4623 YP_003948812.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-66 69
PPSC2_c4623 YP_003948812.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-55 59
PPSC2_c4623 YP_003948812.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 7e-34 45
PPSC2_c4623 YP_003948812.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-33 45
PPSC2_c4623 YP_003948812.1 peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-32 45