Gene Information

Name : PPSC2_c4582 (PPSC2_c4582)
Accession : YP_003948772.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Resistance
Product : heavy metal translocating p-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 4793980 - 4796025 bp
Length : 2046 bp
Strand : -
Note : -

DNA sequence :
ATGGATATCATTCTCAATGAAATGCAAGTACAAGGAACAAAAAATGGAAAGGAACGTGATATGATGCAAGCAGTTCAACG
ACTACAAGATACATTGTCTCCCTCTAACCGAGCACTTACCAAAAACAGTGGCAGCGGACGCCCCGGTCCAAATCGCAAGC
CGCAATTTCAGCTCAAAAGCATGCTGAAAAATAAGGAGATGCAGGCTGCTCTAGGCAGTGGAATGCTAATGCTGATGGCA
TGGGGGGTCTCACATTGGTGGCAATGGCTATCCGTCATTCTCTATGTGGTGTCTTATGCCCTTGGAGGCTGGTCCAAAGC
CAGAGAAGGGATTGAAACCCTGATCCGAGAACATGATCTGGATGTTAATTTACTCATGATCGCTGCGTCTTTAGGAGCTG
CGGCCATTGGCTACTGGAATGAAGGAGCCATGCTGATTTTTATTTTTGCACTCAGCGGTGCGCTGGAGAGCTATACCACG
GAGCGTAGTAGTAAGGATATTTCCGAGCTCATGGCGTTGAAGCCGGAAACAGCTTTGCGCTTGTCTCACGAGGGAACAGA
AACGGTTGGCATTGAGCAGCTGTTGCCAGGCGACCTGCTGCTGGTTAAGCCGGGCGAACTAATTCCGGCGGACGGTCGAG
TCTCCAAAGGTGTGTCGGCAGTGAATCAGGCATCCATTACCGGGGAATCTGTTCCGGTAAACAAGATGGCAGGTGACGAA
GTATATGCAGGCACCATCAATGGAGAAGGCGTGCTATATGTGGAGGTCAGCCAGTCCTCGGAAGATACTTTATTTTCAAA
AATTATTCGTATGGTAGAAGAGGCACGGACCGAAGTTCCCGATTCCCAGCGATTTATTAAAACATTCGAATCGGTATACG
CCCGAATTGTTGTTGCCGTCACGTTGATCGTCATTGTAGGTGCGCCCATTGTATTGGGCTGGACATGGGCAGCGGCGTTT
TACAAGGCGATGGTGTTCCTTGTCGTGGCCTCACCTTGTGCGCTCGTGTCATCCATTATGCCAGTGATGCTATCGGCCAT
TTCCAACCGTGCCCGGCGGGGCATTCTGTTCAAAGGTGGCGCGCATGTGGAGAATATGGCATTGACATCTGTCGTTGCTT
TTGACAAAACGGGCACGTTAACGAAGGGCTCACCCGTGGTCACGGACTGGATTACCGCCCCAGATTACGATGCTGATGAG
CTATTGCATATTGTCGCGACAATCGAAAGCTATTCCTTACATCCGCTGGCACGAGCGATTGTAGCCAAAGCCGAAGCTGA
ATTGGGACAGAGAGAGCTTCTTACAGCGGAGCAAGTGCAGGCTCTTACCGGGTGGGGAATGGAAGGCATCATAGGTGGGG
TGAAATGGAAAATCGGTCGCACGAATGTACTGGATGAACCTGGTCTTCTGGCTGGGCCAGAGTGGGTGGAGAGTCGAGCC
CGACTGGAAGCCGAGGGCAAAACTGTATCCATCATTCTTGCGGATGATCGGATTGCCGGGATGCTGGCGCTGCGTGACGA
GCTGCGTCCACAGGCACAAGAGTCCGTGAAACGTCTGCAAGCACAGGGTATCCGGGTCGTCATGCTGACTGGAGACCGAC
CGGAAACGGCTGCCGTGATCGCGGCGCAGGCTGGAGTCGACGCCGTATATGCTGGCTTAATGCCGGAGGACAAAGTCAGT
CATATTCGCATGCTGCGAGAGCAATACGGGCATGTCGTTATGGTCGGCGACGGTGTGAATGATGCTCCGGCTTTGACTGC
AGCTACTGTAGGGCTGGGCATGGGAATGCACGGCAGTGGAGCAGCACTGGAGGTTGCAGATGTGGTGCTAATGAACGACG
GAATCGAGGAGATTGCTCCGACGATAGCACTGGCGCGCAAGGCGCAGCGAGTGGTCAAACAAAATATGATCTTCGCGGTA
AGTGTCATTGTGCTGCTGGTGATCAGTAACTTTGTGCAAGATATAGCCCTGCCTTTTGGGGTCATTGGACATGAAGGCAG
CACACTCCTTGTCATTTTGAACGGCCTGCGTCTATTGCGCTCATAA

Protein sequence :
MDIILNEMQVQGTKNGKERDMMQAVQRLQDTLSPSNRALTKNSGSGRPGPNRKPQFQLKSMLKNKEMQAALGSGMLMLMA
WGVSHWWQWLSVILYVVSYALGGWSKAREGIETLIREHDLDVNLLMIAASLGAAAIGYWNEGAMLIFIFALSGALESYTT
ERSSKDISELMALKPETALRLSHEGTETVGIEQLLPGDLLLVKPGELIPADGRVSKGVSAVNQASITGESVPVNKMAGDE
VYAGTINGEGVLYVEVSQSSEDTLFSKIIRMVEEARTEVPDSQRFIKTFESVYARIVVAVTLIVIVGAPIVLGWTWAAAF
YKAMVFLVVASPCALVSSIMPVMLSAISNRARRGILFKGGAHVENMALTSVVAFDKTGTLTKGSPVVTDWITAPDYDADE
LLHIVATIESYSLHPLARAIVAKAEAELGQRELLTAEQVQALTGWGMEGIIGGVKWKIGRTNVLDEPGLLAGPEWVESRA
RLEAEGKTVSIILADDRIAGMLALRDELRPQAQESVKRLQAQGIRVVMLTGDRPETAAVIAAQAGVDAVYAGLMPEDKVS
HIRMLREQYGHVVMVGDGVNDAPALTAATVGLGMGMHGSGAALEVADVVLMNDGIEEIAPTIALARKAQRVVKQNMIFAV
SVIVLLVISNFVQDIALPFGVIGHEGSTLLVILNGLRLLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 6e-91 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c4582 YP_003948772.1 heavy metal translocating p-type ATPase BAC0092 Protein 2e-122 47
PPSC2_c4582 YP_003948772.1 heavy metal translocating p-type ATPase BAC0099 Protein 5e-87 41