Gene Information

Name : PPSC2_c4571 (PPSC2_c4571)
Accession : YP_003948761.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : xylose kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1070
EC number : -
Position : 4783878 - 4785401 bp
Length : 1524 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGAGAAGCTAAAACAGGAGCTGGAGCGCTATGTCATCGGCGTGGATTTGGGTACTAGTGCGGTCAAAACGGTGCT
GGTCAACCGTAAGGGGCAGGTGGCTTATGAAACCTCTCAGTCATATCCTCTTCATCAGCCGAAAGCAGGGTATAGCGAAC
AGCAGCCTGAAGACTGGGTGCGTGGGACGTTAGCATCGTTGAAAGAGCTTGTAGAGAAGGCCGGAATCTCCGGAACAGAT
GCTGTGGACGGCATCAGCTTTTCGGGGCAGATGCACGGGCTTGTGCTGACTGACAAGGAAGGCCAAGTGCTTCGTCCAGC
TATTCTATGGAATGACACGCGCACAACGGCACAATGCCGCCGTATTGAAGAACAGCTCGGGCCAGCGCTGCTAAGTATCG
CGCGCAACCGCGCGCTGGAAGGCTTCACGCTACCCAAGCTGCTGTGGGTGCAGGAGCATGAGCCAGACGTGCTGGCTCGT
GCGGCCCATTTTATGCTGCCTAAAGATTATGTGCGCTACTGTCTCACAGGAGGGTTGGCGATGGAGTATTCGGATGCGGC
AGGCACGCTGCTGCTAGACATCGCGAACAAGCAGTGGAGCGAAGAGATCGCAGCTGCGTTTGATCTGCCGTTGTCGCTGT
TCCCGCCGCTGGTGGAATCCTTTGACCAGACGGGTACTCTATTGCCGGAGATTGCGGAGCAGAGTGGGCTTTCGTCTGAA
ACCAAGGTCTATGCAGGTGGAGCAGACAACGCATGTGGCGCGATTGGTGCCGGCATTTTGAGCGAAGGCCGCACCTTGTG
CAGTATCGGCACCTCAGGAGTTGTGCTTTCCTATGAGGAACGCAAGGATATCGACGTTCAGGGACGGGCACATTTTTTTA
ATCATGGTGAGCAGGATGCTTATTATATTATGGGGGTTACACTCGCGGCCGGATATAGCTTGACCTGGTTTAAGGATACC
TTTGCGCCGGAACATTCTTTTGATGCGCTGTTGGAGGATGTAAACTCGATCGAGCCGGGCAGCCGAGGGCTGTTGTTCAC
GCCTTATATCGTGGGCGAACGTACCCCTCATCCGGATGCAGCTATTCGAGGCAGCTTTATCGGGATGGATGCAGGGCATA
AGCTTCCGCATTTTACACGAGCAGTGCTGGAGGGAATTACGTTTTCGCTCAAGGAATCCATTGATATTCTCAGAGGCACG
GGCAAAACGGTGAATGAAGTGATTTCCATCGGCGGCGGTGCGCGTAATGAGACATGGCTGCAAATGCAGGCCGATATTTT
TAACGCGGATATCGTCAAGCTGGAAAGTGAGCAGGGTCCTGCCTTGGGAGCGGCTATGCTGGCTGCATATGGTAGCGGGT
GGTTTGAATCGCTGCAGGCGTGCGCTGAAGCTTTTCTGCGTGAAGCAGCAAGATATACGCCAAATCCGGAACGTGTGGCA
CAGTATGAAGGCTTATACGAGCTATACCGTGAAGTTTATCTACACACACGGGAGCTAAGTGAGCAATTGGCGGTCTATCG
CTGA

Protein sequence :
MQEKLKQELERYVIGVDLGTSAVKTVLVNRKGQVAYETSQSYPLHQPKAGYSEQQPEDWVRGTLASLKELVEKAGISGTD
AVDGISFSGQMHGLVLTDKEGQVLRPAILWNDTRTTAQCRRIEEQLGPALLSIARNRALEGFTLPKLLWVQEHEPDVLAR
AAHFMLPKDYVRYCLTGGLAMEYSDAAGTLLLDIANKQWSEEIAAAFDLPLSLFPPLVESFDQTGTLLPEIAEQSGLSSE
TKVYAGGADNACGAIGAGILSEGRTLCSIGTSGVVLSYEERKDIDVQGRAHFFNHGEQDAYYIMGVTLAAGYSLTWFKDT
FAPEHSFDALLEDVNSIEPGSRGLLFTPYIVGERTPHPDAAIRGSFIGMDAGHKLPHFTRAVLEGITFSLKESIDILRGT
GKTVNEVISIGGGARNETWLQMQADIFNADIVKLESEQGPALGAAMLAAYGSGWFESLQACAEAFLREAARYTPNPERVA
QYEGLYELYREVYLHTRELSEQLAVYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylB NP_814327.1 D-xylulose kinase Not tested Not named Protein 1e-112 48
ef0083 AAM75287.1 EF0083 Not tested Not named Protein 1e-112 48