Gene Information

Name : PPSC2_c4550 (PPSC2_c4550)
Accession : YP_003948740.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4759558 - 4760349 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGCCATTCAGGGTGAACATCTCTCCTTACAACGCGGATATTTCCAGTTGGACGATGTGAACATTACCTTGCCCGC
TGGCCAGCTCACCGCCATTGTCGGTCCCAACGGCTCAGGCAAGTCTACTCTTTTGCGGATTTTGACCCGGCTGCTCAAGC
AGGATCAGGGCAAGGTTTCTATACTGGGCAAGCCCGTGGAGGAATACAAGCGGCGTGATTTGGCTCAGACGATTACAATG
CTGCCGCAAATGAAGGATATTTTGCCGTTATTAACGGTTCGTGAGCTGGTCGCTTATGGAAGATCTCCTCATGCCAAGGG
CTTGAGGACACGACCTACCAGACAAGATCAGCAAATTATCGACCATGTCATGGGAATCACGGGCATCCAGCCCTATGCAG
ATCGGATGTTCCATACTCTATCGGGAGGTGAACAACAAAAAGCGCGAATTGCAATGGCCTTGGCCCAACAAACGGGTATT
CTTTTGCTCGATGAACCGACCACTTTTCTGGATATCGCCCACCAATTTGAAGTTATGGATATGCTGCGGCGTATTAATCA
CGAGTCCGGCTTGACGATTGTTATGGTACTGCATGATTTGCAGCAAGCTGCGGCCTATTGTCATCATATGATTGCGCTTA
AAAGGGGACGAATCGCCGTTGCTGGCGAACCCCGTCAGATTTTGACGTCTGCTTTTCTTCGCGACATTTATGAAATGAAC
GCTACCATCAAATTTGAGGATGGCTATCCGGTTATTATACCGACCATACCACATCATTCAGGAGGAATTTAA

Protein sequence : 
MTAIQGEHLSLQRGYFQLDDVNITLPAGQLTAIVGPNGSGKSTLLRILTRLLKQDQGKVSILGKPVEEYKRRDLAQTITM
LPQMKDILPLLTVRELVAYGRSPHAKGLRTRPTRQDQQIIDHVMGITGIQPYADRMFHTLSGGEQQKARIAMALAQQTGI
LLLDEPTTFLDIAHQFEVMDMLRRINHESGLTIVMVLHDLQQAAAYCHHMIALKRGRIAVAGEPRQILTSAFLRDIYEMN
ATIKFEDGYPVIIPTIPHHSGGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-46 41
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c4550 YP_003948740.1 iron-siderophore ABC transporter ATPase BAC0164 Protein 8e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c4550 YP_003948740.1 iron-siderophore ABC transporter ATPase VFG0925 Protein 2e-47 43
PPSC2_c4550 YP_003948740.1 iron-siderophore ABC transporter ATPase VFG1042 Protein 7e-41 41