Gene Information

Name : PPSC2_c4459 (PPSC2_c4459)
Accession : YP_003948649.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4669225 - 4669962 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAAACTCAATTCAATAACACCGTTATTGAAATTAAAGAGCTGAAAAAAAGGTATGAAGTAGGCGGTCAGGAGAT
TCAGGCTCTACGCAGTGTGAACTTATCTATTAACGAAGGGGAGTTTGTTGCTATCATGGGGCCCTCTGGTTCAGGCAAGT
CTACCATGATGAATGTCATTGGTTGCCTGGATCATCCGGATACGGGTAAATACTATTTGGATGGATATTCCATATTGGAT
GCTCGTGAAAACGAACTTTCAGAGATTAGAAATCAGAAGCTAGGTTTTGTGTTTCAGAAATTCTATCTGCTTCCTCGTAC
TACAGCTTTAGCAAATGTGGAGCTGCCTATGATGTATGCAGGTGTTCCTGCCAAGGAGCGTCGGGAAAGAGCTATAGAAG
CGCTTCGGATGGTGGGTCTTGCAGAACGGATGTATAACAAGCCTAATGAGCTGTCTGGCGGTCAGCAGCAGCGGGTTTCC
ATCGCCCGAGCCTTGGTGAATCATCCGGTCATTCTGCTGGCGGATGAGCCTACGGGCGCACTGGACACGAAGACAAGCAT
CGAGATTATGGAGCTGTTCCAAGGCTTGAATGAGCAGGGAAAAACTATTGTCCTGGTTACTCATGAACTGGAAATAGCGG
AATATGCCAAACGATTGATTAGCTTTCGGGATGGTAACATTGAGCGAGATGAGCCTATTGCGAATAGACGAATTTCATCA
AGGATGGTAAGCCTATGA

Protein sequence : 
MSETQFNNTVIEIKELKKRYEVGGQEIQALRSVNLSINEGEFVAIMGPSGSGKSTMMNVIGCLDHPDTGKYYLDGYSILD
ARENELSEIRNQKLGFVFQKFYLLPRTTALANVELPMMYAGVPAKERRERAIEALRMVGLAERMYNKPNELSGGQQQRVS
IARALVNHPVILLADEPTGALDTKTSIEIMELFQGLNEQGKTIVLVTHELEIAEYAKRLISFRDGNIERDEPIANRRISS
RMVSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c4459 YP_003948649.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-60 59
PPSC2_c4459 YP_003948649.1 ABC transporter ATPase NC_008702.1.4606598. Protein 7e-46 46
PPSC2_c4459 YP_003948649.1 ABC transporter ATPase NC_012469.1.7685735. Protein 9e-32 43
PPSC2_c4459 YP_003948649.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-36 42