Gene Information

Name : PPSC2_c4225 (PPSC2_c4225)
Accession : YP_003948416.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : ribonuclease ph:ham1
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 4448483 - 4449244 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAGATCTAACGGACGAAACGGTGATGAGCTGCGCCCGATGAAATTGACAGCAGGAGTAAATAAATACGCGGAGGG
CTCTGTTTTTATAGAGGTTGGCGAGACGAAAGTCATCTGTACGGCTACAGTGGAAGAACGCGTTCCTCCCTTTATGAAGG
GCCAAGGAAAAGGCTGGGTGACCGCCGAATATTCCATGCTTCCGCGGGCGACACATAGCCGCAATCAGCGTGAAGCTGCG
CGCGGCAAGTTGACAGGCCGTACTATGGAAATTCAGCGTCTGATCGGAAGAGCGTTGCGTTCGGTTGTCAATTTGCAGGC
GCTTGGTGAACGGACGATTACGTTGGACTGTGACGTCATTCAGGCGGACGGCGGGACACGTACAACCTCCATTACCGGTT
CTTTCGTAGCATTGGCGATTGCAGTAAATAAAATTGCGATCCAGCACAAGTTGCCTGTTTTCCCTATTACGGATTTCCTA
GCTTCTGTCAGCGTAGGGGTTGTTGGTGACAAGGCGCTGCTGGATCTGAATTATGAAGAGGATTCCAAGGCCAAGGTGGA
CATGAATCTCGTCATGACTGGCAGTGGAAAGTACGTTGAGCTGCAAGGTACAGGGGAAGAAAGTCCATTCGACCGTCAGG
AACTGGATCAGCTGCTTAGCTTGGGCGAACAAGGGATTCTGCAAATGATTGAGCGCCAAAAAGAAGTGCTCGGACCGATT
GCTGATAAGATTGGTGCTGGACGTACAGGAGCTGGGGCCTAA

Protein sequence :
MSRSNGRNGDELRPMKLTAGVNKYAEGSVFIEVGETKVICTATVEERVPPFMKGQGKGWVTAEYSMLPRATHSRNQREAA
RGKLTGRTMEIQRLIGRALRSVVNLQALGERTITLDCDVIQADGGTRTTSITGSFVALAIAVNKIAIQHKLPVFPITDFL
ASVSVGVVGDKALLDLNYEEDSKAKVDMNLVMTGSGKYVELQGTGEESPFDRQELDQLLSLGEQGILQMIERQKEVLGPI
ADKIGAGRTGAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-58 54