Gene Information

Name : PPSC2_c0394 (PPSC2_c0394)
Accession : YP_003944619.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : N-acetylmannosamine-6-phosphate epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3010
EC number : -
Position : 451444 - 452163 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAATGGAAGGTGTATTATCCAAGGTTCGGCATGGACTGATCGTTTCCTGTCAGGCGCTACCAGGCGAACCGTTGCA
TGGAGCAGATTCTATGGTCAAAATGGCGCGTGCTGCACAGGAGGGTGGAGCTGTAGCGATTCGTGCCAATGGTGCATCGG
ATGTACGTGCGATTAAACAGGCGATCCCTCTACCAGTCATTGGTTTGATTAAACGGGATTATAATGATTCTGATATTTAC
ATTACGCCTACCCTCCGTGAAATGGAGGAACTGGTGGAGGCAGGTGCGGATATCATTGCGCTGGATGCCACATTGAGACC
GCGCCCAGCTGGGTGTAAGTTGAAACACCTCATAGATTACGCCCATGAGCACGGAGTCGCTTCCATGGCGGATATATCGA
CACTAGAGGAAGCACTTCATGCGGCTTCCCTTGGTATAGGCTGCGTATCCACGACGTTATCCGGTTATACGCCATATTCT
ACTCAGATAGAGGGTCCGGATCTGGAATTGGTTCGGAGAGCATCAGAGCTGGTTCCTGTTCCTGTCATTGCAGAGGGCAG
AATCCATGATCCGGCACAAGTAGAGGAAGCGTTTCGGCTGGGTGCACATGCAGTGGTTGTAGGCTCGGCGATTACTAGAC
CCCAATTGATTACGCAGCGGTTTGCCGATGCCGCAAGGAAGGCAGTGAAATGCATCTATGGAGATGAACGACCGAATTAA

Protein sequence : 
MGMEGVLSKVRHGLIVSCQALPGEPLHGADSMVKMARAAQEGGAVAIRANGASDVRAIKQAIPLPVIGLIKRDYNDSDIY
ITPTLREMEELVEAGADIIALDATLRPRPAGCKLKHLIDYAHEHGVASMADISTLEEALHAASLGIGCVSTTLSGYTPYS
TQIEGPDLELVRRASELVPVPVIAEGRIHDPAQVEEAFRLGAHAVVVGSAITRPQLITQRFADAARKAVKCIYGDERPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0540 NP_814312.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested Not named Protein 7e-41 47
ef0066 AAM75271.1 EF0066 Not tested Not named Protein 1e-34 47
VC0395_A1378 YP_001217321.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-26 41
VC1781 NP_231416.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-26 41
nanE ACA01846.1 N-acetylmannosamine-6-phosphate epimerase Not tested VPI-2 Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0394 YP_003944619.1 N-acetylmannosamine-6-phosphate epimerase VFG1114 Protein 7e-27 41