Gene Information

Name : PPSC2_c3964 (PPSC2_c3964)
Accession : YP_003948156.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : sugar-specific permease, sgat/ulaa
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 4147880 - 4149130 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATGTTTATGAGCATTATCAGGGAGCCATCCATCATAATTGCGATTGTGACATTACTCGGTCTCATATTCCAGAG
GAAGAAAGTATCCGAGATCATAACGGGAACTACCCTTTCTTTCATGGGCTTTACCATGATTAAGGTCGGAGGCGGAATTT
TAGGAGGCGTGCTCACCAACTTCAGCCAAATATTTTCTTTTGCGTTCAACCTTAAAGGTGTCGTACCAAGCAATGAAGCT
ATCATGGCCCTGACCATTGATCAGATCGGGGCGGATGCTGCGCTCATTCTACTTTTTTCCATGATCCTTAACATCGTGCT
TGCGCGCCTGACCAAGTTCAAGTACATTTATTTGTCTCTCCACTTGATTTTGTTCATGAGCTTTGCCGCTACAGCCGTTA
TGAAAGGTCTGGGTCTCAGTTCGCTAACTACAATCATCGTTGGTTCCTTGGTCATTGGGAGCTATATGGCAGTGTTTCCT
TACCTGCTCCGAAATGCCAGCAAAAATATTATCAAATCGGATGAATATACAATTGCTCATGCTTCCATGACTTCTTACAT
TCTCGGTACCTATTTAGGAAAAGTTTTAGGCAATCGTGAACATGACACCGAAAATGTAAAAATAAATGACCGCATCAGTT
TTTTGCGTGATCCCAATGTGGCAACAACCTTGACGATGCTGGTGCTTTTGTTGGTATCTGGACTGGTTGCTGGTTCTGAA
TATGTCAGCAAATTATCTAACGGCAAAGAATACCTCGTCTTTATCCTCGAACAATCAGCCACTTTTGCTGCTGGCTTGTA
TATCGCAAAAGCAGGTGTTAAGCTGTTCACGACTGAAATTGTACCCGCTTTCAAGGGGTTCTCCCAAGTGTTCGCACCTG
GAGCAGTTCCTGGGGTGGATGTTCTGGTACTGTTCGACAAATCACCCAATTCCGCGTTGGTAGGCTTCTTGGTCAGCTTT
TTCACAGGTGTGGCCTGCGTTTTTGTTTTCCCGCTTATTGGATTGCCTGTTATTGTACCGGGGATCATGGCCTGTTTTCT
CGCTGGCGGTGCAGCCGCGATATTTGGCAATTCCAGCGGTGGTTTTAGAGGGGCAGTCATTTCCAGTTGTCTTAATGGAT
TCTTGCTATGTCTGCTGCCGGCTCTCACCTTGCCGCTCTTTTCTTTTTTGGGTGCCGACGGAGTGACATTCGCCGATCCC
GACTTTACAACCCTTTCCGGATTACTTTGGCTTATTTTCCGCTGGTTTTAA

Protein sequence :
MEMFMSIIREPSIIIAIVTLLGLIFQRKKVSEIITGTTLSFMGFTMIKVGGGILGGVLTNFSQIFSFAFNLKGVVPSNEA
IMALTIDQIGADAALILLFSMILNIVLARLTKFKYIYLSLHLILFMSFAATAVMKGLGLSSLTTIIVGSLVIGSYMAVFP
YLLRNASKNIIKSDEYTIAHASMTSYILGTYLGKVLGNREHDTENVKINDRISFLRDPNVATTLTMLVLLLVSGLVAGSE
YVSKLSNGKEYLVFILEQSATFAAGLYIAKAGVKLFTTEIVPAFKGFSQVFAPGAVPGVDVLVLFDKSPNSALVGFLVSF
FTGVACVFVFPLIGLPVIVPGIMACFLAGGAAAIFGNSSGGFRGAVISSCLNGFLLCLLPALTLPLFSFLGADGVTFADP
DFTTLSGLLWLIFRWF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 2e-56 43
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 3e-56 42
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 3e-56 42