Gene Information

Name : PPSC2_c0341 (PPSC2_c0341)
Accession : YP_003944566.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 389415 - 390830 bp
Length : 1416 bp
Strand : +
Note : -

DNA sequence :
ATGCTTAAAACGAAAATTATTTGTACTATGGGACCTGCCTGTGACTCCATTGATTTGTTAAAAGAAATGATCCAGGCTGG
TATGACGGTAGCTCGCTTAAACATGGCTCATGGGGAGCTGGAGGATCATGTTAAACGTATTGAAAATGTAAGACAGGCAG
CGAAGGAAATGAATACCTGTATCCCTGTCATGATGGATATTAAAGGACCGGAAATACGGATTGGCAAGCTGAAAGAGGCA
TCTGTTCTACTGAAGCCAGGCAGCCAGCTCATTCTGACCACGGAAGAGATTTTGGGGGACGAGCATCGTATTTCGGTGAA
TTACCCAGATATGCCGAAGGATATCAAAACAGGTGACCGCATTCTCATCGACGACGGTTTGGTTGATTTGACTGTAACCT
CCATCGAAGGAACCGAGATGATTTGTAATATCGTAAGCGGCGGTATTTTGAAGCCGAGAAAAGGTGTGAATCTGCCAGGG
ATTCATACAACTCTTCCAGGCGTAACAGAGCGCGACGTGAAGCACATTCAATTTGGGGTGGAGCAGCGTATCGAGCTTAT
TGCGGCTTCTTTTGTGCGTAAAGGCGACGACATCCGTGAAATCCGTGAGATTTTGAAGGGACATCATGCCGAGCACGTAC
AGATTTATTCCAAAATTGAAAATGCCGAAGGCATGGAAAACCTGGATGATATCATCGAAGCTTCGGACGGTATTATGGTA
GCTCGTGGCGACCTGGGCGTGGAAGTGCCGATTCAAGACGTGCCTGTGATGCAAAAAGAAATGATCGACAAGTGTAATCT
GGTCGGTAAGCCCGTTATTGTCGCTACTCACATGTTGGAGTCCATGCAGGTGAACCCGCGTCCGACGAGAGCTGAAGTTA
GTGACGTGTTCAATGCCGTTATGCAGGGAGCTGACGTAGTGATGCTGTCGGGCGAATCTGCTGCAGGTAAATACCCTGTT
GAATCCGTACGGACCATGGCTGCGGTAGCTGCCAGTGCAGAATCCCAATTGGATTACCAGGAGCAGTTCGATAAGCGCAG
AGCACGCCAAAGCACCAACATTACTGAAGTCATTAGTCAGGGTGCGGTGAGTTCGTCTCTGGAGCTGGATGCCAAAGCGA
TTATTACCTCGACTGCCAGTGGATTCACGGCTCGTATGGTGTCCAAATATCGTCCGAAGGCACCGATCATTGCGGTTACT
CCGAATAACACAGTATTCGCTAAAATTTGCCTCTTGTCCGGTGTATTCCCGATTAAAGGGGATAAGGTAGCCACAACGGA
TGAAATGTTCGAATCTTCCATCCGTAACGCGCTGAATGCAGGCTATATCCAAAAAGGAGATACTGTAGTCCTGTCAGCAG
GTGTTCCTGTAGCTGAGGCGGGCACTACCAATCTGATTCGGGTATATCAAGCGTAA

Protein sequence :
MLKTKIICTMGPACDSIDLLKEMIQAGMTVARLNMAHGELEDHVKRIENVRQAAKEMNTCIPVMMDIKGPEIRIGKLKEA
SVLLKPGSQLILTTEEILGDEHRISVNYPDMPKDIKTGDRILIDDGLVDLTVTSIEGTEMICNIVSGGILKPRKGVNLPG
IHTTLPGVTERDVKHIQFGVEQRIELIAASFVRKGDDIREIREILKGHHAEHVQIYSKIENAEGMENLDDIIEASDGIMV
ARGDLGVEVPIQDVPVMQKEMIDKCNLVGKPVIVATHMLESMQVNPRPTRAEVSDVFNAVMQGADVVMLSGESAAGKYPV
ESVRTMAAVAASAESQLDYQEQFDKRRARQSTNITEVISQGAVSSSLELDAKAIITSTASGFTARMVSKYRPKAPIIAVT
PNNTVFAKICLLSGVFPIKGDKVATTDEMFESSIRNALNAGYIQKGDTVVLSAGVPVAEAGTTNLIRVYQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-94 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-93 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-93 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-94 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c0341 YP_003944566.1 pyruvate kinase VFG0479 Protein 2e-94 45