Gene Information

Name : PPSC2_c2313 (PPSC2_c2313)
Accession : YP_003946526.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Resistance
Product : alkaline phosphatase synthesis transcriptional regulatory proteinphop
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2379991 - 2380665 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGACACGTGTATTAGTGGTTGATGATGACCCGCATATTCGTGAACTCGTCGGACACTTTCTGAGACTGGAAGGTCTGGA
AGTCGTCGAGGCGGTGGATGGTTTGGACGCTATGCGCTTGTTTGATGAAACTAAGGTCGATTTGCTTGTCCTCGATATCA
TGATGCCAGGGATGGATGGCTGGGAGCTGTGCCGTAAGCTGCGCGAGCAGACCGACCTGCCGCTGCTGATGCTTACTGCC
AAAGGCGAGACGTCACAGATTGTAAAAGGCTTCGCGCTTGGAACGGACGATTATCTTGTTAAGCCCTTCGATCCTATGGT
GCTTGTTGCACGCGTAAAGGCTTTACTAAAACGCTATCGGATCATGGCTTCAAAATCGGTGACTATCGGAGATCTTGTCC
TGCGCAGCGATACATTTGAGTGTCAGGCTGGAGAGCAGGGAATTACCCTGCCACGCAAGGAATTTGAACTGCTCTTCAAG
CTGGCCAGCTATCCTGGCAAAACCTTTACACGCGACCATTTGATCGAACAGATCTGGGGTTATGATTACGAGGGAGACGA
AAGAACGGTTGATGTGCATATCAAGCGCCTTCGGGAACGATTTCCGGAGGCAACCCAATCCTTTGCGATCCGTACGATCC
GGGGATTGGGGTATCGGCTGGAGATAAGGCAATGA

Protein sequence :
MTRVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWELCRKLREQTDLPLLMLTA
KGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIMASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFK
LASYPGKTFTRDHLIEQIWGYDYEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLEIRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-39 43
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 4e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop AF310956.2.orf0.gene Protein 1e-39 43
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop U35369.1.gene1.p01 Protein 1e-38 43
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop AE016830.1.gene2255. Protein 1e-38 43
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop HE999704.1.gene2815. Protein 3e-39 43
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_002952.2859905.p0 Protein 4e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_007793.3914279.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_007622.3794472.p0 Protein 4e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_002745.1124361.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_009782.5559369.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_002951.3237708.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_003923.1003749.p0 Protein 5e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_002758.1121668.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_009641.5332272.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop NC_013450.8614421.p0 Protein 6e-40 42
PPSC2_c2313 YP_003946526.1 alkaline phosphatase synthesis transcriptional regulatory proteinphop AE000516.2.gene3505. Protein 1e-34 41