Gene Information

Name : PPSC2_c2104 (PPSC2_c2104)
Accession : YP_003946317.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : flagellar transport protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2178424 - 2179179 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAAAAGATTATACTAGCATGTTTGCTGCTTGTCTTGTTCAGCTTCATTTCGGTGACGGCGGCCTCTGCGGAACC
GATTCCGAACATTGATATTCAAGTCGGCAATTCGGACAAAGGACAGCCCGGTGCCACCTCGCTGTCTATTATTTTACTTA
TTACTGTCATTAGTGTAGCGCCCGCGTTGCTTGTACTTATGACAAGTTTTACGCGTATCGTGATTGTACTTGGCTTTGTG
CGAACTTCACTGGGAACTCAGCAGATGCCGCCTAATCAGGTGCTTGTTGGACTGGCCTTGTTTCTCACCTTATTTATTAT
GGCGCCGACCTTCTCAGCTATGAACGAAACTGCGCTTCAGCCGTATCTCAAGGGGGATATAACACAGTCTCAGGCACTAG
ATAAGGCATCGGTACCGATTAAGACTTTTATGTTCTCTCATACACGTGAGAAGGATCTACTGCTCTTTATGAAATACACC
AAGATGGAAAAACCAAAAAACTATCAAGATATTCCACTAACGGTGATGGTTCCGGCATATGCAATCAGTGAGTTGAAAAC
AGCATTTCAGATGGGCTTTATGATTTTTATACCCTTTTTAGTTATAGACATTGTAGTGTCCAGTACACTCATGGCTATGG
GGATGATGATGCTACCACCGGTAATGATCTCGCTTCCTTTTAAAATACTACTTTTCGTACTTGTAGATGGTTGGTATTTG
GTCGTCAAATCATTACTTCTGAGTTTTAATACATGA

Protein sequence : 
MRKKIILACLLLVLFSFISVTAASAEPIPNIDIQVGNSDKGQPGATSLSIILLITVISVAPALLVLMTSFTRIVIVLGFV
RTSLGTQQMPPNQVLVGLALFLTLFIMAPTFSAMNETALQPYLKGDITQSQALDKASVPIKTFMFSHTREKDLLLFMKYT
KMEKPKNYQDIPLTVMVPAYAISELKTAFQMGFMIFIPFLVIDIVVSSTLMAMGMMMLPPVMISLPFKILLFVLVDGWYL
VVKSLLLSFNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-22 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-22 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c2104 YP_003946317.1 flagellar transport protein FliP VFG1259 Protein 3e-49 57
PPSC2_c2104 YP_003946317.1 flagellar transport protein FliP VFG2016 Protein 2e-44 57
PPSC2_c2104 YP_003946317.1 flagellar transport protein FliP VFG2338 Protein 7e-42 56
PPSC2_c2104 YP_003946317.1 flagellar transport protein FliP VFG2494 Protein 3e-44 55