Gene Information

Name : PPSC2_c1745 (PPSC2_c1745)
Accession : YP_003945960.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1848179 - 1849609 bp
Length : 1431 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCAAAACTAAGATTGTATGTACCATCGGTCCTTCCAGTGAATCATTGGAAAATGTGAAGAAACTGATTATGGCTGG
TATGAACGTAGCCCGCCTGAATTTCTCTCACGGTGATTTCGAGGAGCATGGCAACCGGATTAAAAACATCCGTCAAGCTT
GTAAGGAGCTTAACAAAAATGTTGCTATTTTGCTCGATACGAAGGGGCCGGAAATCCGGACAGGAAAGCTCGAAGTTGAA
CCTATTGAGCTTGTTCAGGACGAGTTCATTACGCTGACAACGGAAGAAATTCTCGGTACGCAAGATCGTATCTCCATTAC
GTACAAGGATCTTCCCTCGGACGTGGAGCCCGGCTCCACCATTCTGATCGACGATGGTCTGATCGGACTCACCGTTATTG
AAGTATCAGGCACTGAAATCAAATGCCGCATTGTCAATGGCGGAACGATCAAAAGCAAGAAGGGCGTTAACGTTCCAGGC
GTTGCTATCTCATTGCCTGGTATTACGGAGAAAGATGCTAATGATATCATTTTTGGTATTGAGCAGGACATTGATTTCAT
CGCAGCTTCTTTTGTTCGTAAAGCAAGTGATGTACTGGAAATCCGTGAATTGCTGGCGAAGCACAACGCAAGCCACATTC
AAATCATTTCCAAAATTGAAAACCAGCAAGGTGTTGACAACCTGGATGAAATTTTGGAAGCTTCGGATGGTCTGATGGTT
GCTCGTGGTGACCTCGGTGTGGAAATTCCTGCTGAAGAAGTGCCTCTGGCCCAAAAATTGATGATTAACAAATGTAATGT
AGCTGGCAAGCCTGTTATTACAGCAACACAAATGCTGGATTCCATGCAACGTAACCCGCGTCCGACTCGTGCGGAAGCAA
GTGACGTAGCCAATGCTATTTTTGACGGAACAGATGCAATTATGCTGTCCGGCGAAACCGCTGCTGGGAAATATCCGGTA
GAATCCGTATTGACAATGTCACGTATTGCCGAAAAAGCTGAGTCTTCTCTGAACTACCGCGATTTGTTCAAAAAACAAAG
AACGGCGCAAGAAATTAGTATTACAGAAGCAATCAGCCAATCCGTTTCTATTTCTGCTCTTGACCTGCATGCCAAAGCAA
TCCTGACGTCCACACAAAGCGGAACAACGGCGCGTATGATCTCTAAATACCGTCCAGAAGCTCCGATTATCGCTGTGACA
ACACAGGAAAGAACAGTTCGCCGTTTGGCTCTGATCTGGGGCGTACATGCAGTACAAGGCAGACCAATCGTCGACACAAC
AGATAGTCTGTTTGACAATGCGCTGGAAGGTGGTCGCAAATCTGGCCTCGTTAAAGAGGGCGATTTGGTTGTGATTACAG
CGGGCGTACCTCTTGGTGATTCCGGTTCCACGAACCTGATCAAAATTAGCTGCGTTCCAGCACAAGCGTAA

Protein sequence : 
MRKTKIVCTIGPSSESLENVKKLIMAGMNVARLNFSHGDFEEHGNRIKNIRQACKELNKNVAILLDTKGPEIRTGKLEVE
PIELVQDEFITLTTEEILGTQDRISITYKDLPSDVEPGSTILIDDGLIGLTVIEVSGTEIKCRIVNGGTIKSKKGVNVPG
VAISLPGITEKDANDIIFGIEQDIDFIAASFVRKASDVLEIRELLAKHNASHIQIISKIENQQGVDNLDEILEASDGLMV
ARGDLGVEIPAEEVPLAQKLMINKCNVAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPV
ESVLTMSRIAEKAESSLNYRDLFKKQRTAQEISITEAISQSVSISALDLHAKAILTSTQSGTTARMISKYRPEAPIIAVT
TQERTVRRLALIWGVHAVQGRPIVDTTDSLFDNALEGGRKSGLVKEGDLVVITAGVPLGDSGSTNLIKISCVPAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-110 54
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-110 54
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-109 54
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-110 54
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c1745 YP_003945960.1 pyruvate kinase VFG0479 Protein 2e-110 54