Gene Information

Name : PPSC2_c1381 (PPSC2_c1381)
Accession : YP_003945601.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1522983 - 1523819 bp
Length : 837 bp
Strand : +
Note : -

DNA sequence : 
GTGACCAAACAAAGTGAATTACAGAAGGTGTATGATCGGGCGCTAGAGGTAGCAGGCCTGACCCGTGCTTATGGAAAGTT
CCATGTGTTGAAGAATATTAGCTGGAACGTAGACGAAGGAGCTTGGTGGGGGATCATTGGTCCGAATGGGAGTGGAAAAT
CGACGTTGCTGCATCTGCTTTCTGGCGTAGATCAGCCGACTTCTGGAAGTGTTCATATCTATGGTAAAAAGGTCGGTAGC
TACAGCAGAAAAGAGCTTTCTCAACTTGTAGCCGTACTCCAGCAGGAGGGAATTCCTCCAGTGGGATACACCGTCAGGGA
AGTTATAGAAATGGGACGGTTTCCTCATCAGGACTGGCTAGGCAGGGAAAAGGGAGTTGATGTGGAGGCGATTACGGATC
GGGTCCTAGCGCGATTGAGTCTAACTTCACTGGCCGACAGAACATTGGACCGCTTGAGTGGGGGACAGCGACAGCGTGTA
GCATTAGCAAAGGTGATGGTACAGGAGCCACAGGTATTGCTGCTGGACGAACCTACGACTTATCTGGATTTGCGCTATCA
GCTTGAATTTATGGAGTTGCTGGCAGAATGGCGCCAAGAAACGGGCGTGACAATCATTGCTGTCCTGCATGATCTTAATT
TGGCGGCACAGTTTTGCGATAATTTGCTTGTACTTAAGGATGGAATGGTTGAAGGATTGGGTACTTCATCGGATTTGCTA
ACAGAGGACCGGATTCGTCGTGTATATGGTGTTGAGCCTGTGATGCTTCCGCATCCCGATAGCGGTGTGCCGCAGCTCTT
GCTGCGCAGAAGCGCTGCGTCTACAGCAGACCAATAG

Protein sequence : 
MTKQSELQKVYDRALEVAGLTRAYGKFHVLKNISWNVDEGAWWGIIGPNGSGKSTLLHLLSGVDQPTSGSVHIYGKKVGS
YSRKELSQLVAVLQQEGIPPVGYTVREVIEMGRFPHQDWLGREKGVDVEAITDRVLARLSLTSLADRTLDRLSGGQRQRV
ALAKVMVQEPQVLLLDEPTTYLDLRYQLEFMELLAEWRQETGVTIIAVLHDLNLAAQFCDNLLVLKDGMVEGLGTSSDLL
TEDRIRRVYGVEPVMLPHPDSGVPQLLLRRSAASTADQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-36 41
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c1381 YP_003945601.1 ABC transporter BAC0164 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPSC2_c1381 YP_003945601.1 ABC transporter VFG1042 Protein 2e-36 41
PPSC2_c1381 YP_003945601.1 ABC transporter VFG0925 Protein 1e-39 41