Gene Information

Name : PPSC2_c1329 (PPSC2_c1329)
Accession : YP_003945550.1
Strain : Paenibacillus polymyxa SC2
Genome accession: NC_014622
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1472899 - 1474935 bp
Length : 2037 bp
Strand : +
Note : -

DNA sequence :
TTGATCATGAAGGAAGAACGCAAACGCATGCTGGATAGAAGCATCTTGAAGCAGGCGATCAAGGATAGCTTTATCAAATT
AAATCCAATGATCATGATGAAAAATCCTGTCATGTTCGTCGTAGAGATCGGTACATTGGTTGTGTTGCTCATGCTGCTGC
TTCCCGGTTATTTTGGAGTCGGCAAGGAAATGGGCTTTAACTTGGCTGTATTTATTATTCTGTTGTTCACGCTGCTTTTT
GCTAACTTTGCCGAAGCGCTCGCGGAGGGACGGGGGAAGGCACAAGCTGCTTCCTTGAAAAAATCCAAGCAGGACTCGCA
AGCTAATAAGCTTGTCGGAAATGAGATTCAGGTAGTCAGCTCCACAGCATTGCGTAAAGGTGACGTGGTAATCGTCTCTC
AGGGCGAAATGATTCCAAGTGATGGTGAGGTCATTGAAGGCCTGGCTTCGGTGGATGAATCTGCGATTACGGGAGAATCA
GCTCCGGTCATTAAGGAATCGGGCGGTGATTTTTGCTCGGTAACTGGCGGGACGCGGGTGGTCAGTGACCGCATTAAGGT
GCGAATTACGACTGAGCCGGGTGAGACGTTTATTGATAAAATGATTTCGCTCGTGGAAGGTGCACAGCGGCAAAAAACGC
CAAATGAAATTGCGCTGAATACATTGCTGATTAGTTTGACGATTATTTTTCTAATTGTGGTGGTGACACTGGCTCCGATA
GCCCGTCATTTTAAGATTGATTTGCCTGTTCCCGTGCTGATTTCGTTGCTAGTCTGTCTGATTCCGACCACGATTGGCGG
GCTTTTGTCGGCTATTGGGATTGCCGGTATGGACCGGGTTACCCAGTTTAACGTGCTGGCCATGTCAGGCAAGGCGGTAG
AAGCATCCGGGGACATCAACACGATGATTCTCGATAAAACGGGTACCATCACCTTCGGAAACCGGATGGCGAGTGAATTC
GTGGTGGTAGATGGTGTAGAAAAGGCAGAGTTAGCGAAATGGGCGGCGATGAGTTCACTAAAGGATGAGACACCTGAGGG
GCGCTCGGTGCTGGAATTGATGCGCAAGCAGGAGTACACGCTGGATGAATCCTTGGCAGCAGGTGGGACCTTTATCGAGT
TCAAGGCAGAAACCCGGATGAGTGGTCTGGATCTCGCCGATGGACGAAGAGTACGCAAAGGCGCCGTGGACTCTGTCCGG
CAGTGGATTGTATCGCAAAAAGGCAGTGTTCCGGCCGATCTGGAGGAAAAAGCAAATCAGGTAGCCGCAGAAGGAGGTAC
ACCGTTAGCGGTGGCGCTGGATGATCGGATATACGGCATTATTTATTTGAAGGATACGGTGAAGCCGGGCATGAAGGAGC
GCTTCGATCAGCTTCGGGAAATGGGCATCCGCACGATTATGTGTACCGGTGATAATCCGCTGACCGCTGCTACAATTGCA
CGTGAAGCAGGTGTGGACGATTTTGTAGCAGAAAGCAAGCCTGAGGACAAAATTGCGGTTATCCGCCGTGAGCAGGAGCA
GGGCAAGCTGGTTGCCATGACTGGAGATGGTACCAATGATGCGCCTGCGCTGGCCCAGGCAGATGTCGGTCTTGCCATGA
ATAGCGGTACGGTCGCGGCCAAGGAAGCTGCTAATATGGTGGACCTGGATTCTGATCCGTCCAAAATTATTGAGGTGGTC
GCCATCGGTAAGCAGCTGCTTATGACACGCGGGGCATTGACAACGTTCAGTATTGCGAACGATGTTGCTAAATATTTTGC
CATCATTCCGGCGATGTTCATGCTGGCTATTCCACAAATGAGTGCACTGAATGTCATGGGACTGGGTTCCCCGCTCTCGG
CTATTTTATCGGCGCTTATTTTTAATGCAGTCATTATTCCACTTCTGATTCCGCTGGCAATGAAGGGCGTGAAGTATAAG
CCAATGAGCTCGGATCGTTTGTTGGGACGGAATTTACTGATTTATGGCCTGGGCGGTATGGTGGTACCGTTTGTCGGCAT
TAAGGCCATTGATTTGCTGGTACATTTGTGGATTTAG

Protein sequence :
MIMKEERKRMLDRSILKQAIKDSFIKLNPMIMMKNPVMFVVEIGTLVVLLMLLLPGYFGVGKEMGFNLAVFIILLFTLLF
ANFAEALAEGRGKAQAASLKKSKQDSQANKLVGNEIQVVSSTALRKGDVVIVSQGEMIPSDGEVIEGLASVDESAITGES
APVIKESGGDFCSVTGGTRVVSDRIKVRITTEPGETFIDKMISLVEGAQRQKTPNEIALNTLLISLTIIFLIVVVTLAPI
ARHFKIDLPVPVLISLLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEASGDINTMILDKTGTITFGNRMASEF
VVVDGVEKAELAKWAAMSSLKDETPEGRSVLELMRKQEYTLDESLAAGGTFIEFKAETRMSGLDLADGRRVRKGAVDSVR
QWIVSQKGSVPADLEEKANQVAAEGGTPLAVALDDRIYGIIYLKDTVKPGMKERFDQLREMGIRTIMCTGDNPLTAATIA
REAGVDDFVAESKPEDKIAVIRREQEQGKLVAMTGDGTNDAPALAQADVGLAMNSGTVAAKEAANMVDLDSDPSKIIEVV
AIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFMLAIPQMSALNVMGLGSPLSAILSALIFNAVIIPLLIPLAMKGVKYK
PMSSDRLLGRNLLIYGLGGMVVPFVGIKAIDLLVHLWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-151 59
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-151 59
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-151 59
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-151 59
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-151 59
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-151 59
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-134 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 6e-134 57