|
Name : Entcl_0678 (Entcl_0678) Accession : YP_003940237.1 Strain : Enterobacter cloacae SCF1 Genome accession: NC_014618 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 707581 - 710496 bp Length : 2916 bp Strand : - Note : SMART: DEAD-like helicase; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; KEGG: wsu:WS1129 hypothetical protein; PFAM: type III restriction protein res subunit; protein of unknown function DUF450 DNA sequence : ATGGCAACGCAAAGCGAATACGAGTTAGAAACGCAGCTGGTGGAGCAGCTGGTGGGCATGCACTATGAACGGGTGAATGT CACCGATGAAGCTAGTATGAAAGCCAACCTGCGAAAGCAGATCGAAATTCACAACCGGCTGGAGCAAGCTCCGCTAACTG ATAGCGAATTTAACCGTATTTTTTTGCATCTAACCAAAGGCAATGAAGTCATCGATCGCGCTAAGATCCTGCGCGATCGC TACCAGTTATTGCGAGATGACGGCACCGAGAAATGGCTCAGCTTTATCAATAAAGAGGAGTGGTGCCAGAACGAGTTTCA GGTAACGAGTCAGGTGAAGCAGTTCAACGCCGAGCAAAACACACGCAAAACTCGCTTCGACGTCACGCTGCTGATCAACG GACTGCCGCTGGTGCAGATCGAACTTAAGCGTCGCGGCCTGGGGCTGAAAGAAGCCTTTAATCAGATCAATCGTTATCAT CGCGATGCGTTCTGGGTCGGCAGCGGCCTGTTCCAGTATGTGCAGATCTTTATTATCAGCAACGGCGTGGATACCAAATA CTACGCCAACAACCGCGCCAACCATTTCGAGCAGACCTTCTTCTGGACCGATGAAAAGAATAATCCGCTCAAAGCGCTGG AGAAATTCACCGACGCATTTCTGAAAGTGTGTCACATCGCCAAAATGATCACTCACTACACAGTGCTGAACGAAACCCGT AAGTGCCTGATGGTGATGCGCCCCTATCAGTTTTACGCCTGTGAGGCGATGATCCACCATGTGAAGGACAATCTCCACAA GCAGGGACGGCCGGAGAACGGCTATATCTGGCACACCACCGGCTCCGGTAAAACGCTGACCTCGTTCAAAGCCAGTCAGG TGATCATGGAAATGCCAGAAGTGGATCGGGTCATTTTTGTGGTCGATCGCCGGGATCTGGATTATCAGACGGCGAAAGAG TTCAACGGCTTTGCGAAAGACAGCGTGGATACCACCAACAACACCAGTACGCTGATAAAACATCTTAAGCAAAGCAGCAC CAAACTGACCCTGACCACTATTCAGAAGCTGAATAACGCTATCACCCATGAAGGGTATAAAGCGCAGCTCGCACACCTGC GCAAAGAGCGCATCGTCTTTATCTTCGATGAATGCCACCGCAGCCAGTTCGGTGATACGCATAAAGCGATCGTGAATTTC TTCGAGAATGCTCAGCTGTTTGGTTTTACCGGGACGCCAATCTTTGCCAATAACGTCAATATCACCAACGGTGTCAAACA GACCACCGAACTGTTGTTCGATAAATGCCTGCATAAATACGTGATTGTCGACGCTATCCGGGATGAAAACGTTCTGCGCT TTGCCGTGGAATATGTCGGTACGTACAAGCGCAAAGAGAGCAGCAATGAGATCGATATTGATGTGGAAGATATCGACACC AAAGAGGTAATGGAAAGCGACATCCGGTTGGGCAAAATCACCGACTATATCCTTGCTCATCATAACGCCAAGACTCGCAA TCGCGAGTTCACCGCTATGTTCTGCGTCGGGTCAGTCGATATGCTGATCACCTACTACAAACTCTTTAAAGAAAAGCAGG CCGCACTGCAAGCGGCGGATGCCAATTACAAGCCGTTAAAGATTGCCACCATCTTCACCTACGCCGCCAATGAAGCGGAC AAAAGTGATAAAGAGGCGGTAAACGGCCTGCTGGATGAAGAAGATATCAGCCTGCCGCAGGGGGCGAAAGTTGACACCTC AAGTCGCGATCATCTGGATAGTTTTATTGAGGATTATAACGAGCTGTATGGCACCAGTTACTCGGCCAATGATTCAAAGA GCTTCTACAATTACTACAAAAATATTGCTCAGCGCACCAAAGAGAAAGGCATCGATATTCTTCTGGTAGTGAATATGTTC CTCACCGGCTTCGACAGCCCTGCGCTGAACACGCTGTATGTTGATAAAAACCTGCGTTTTCACGGCCTGGTACAGGCGTT TTCCCGCACTAACCGCATCCTTAACGAAAAGAAAAGCCACGGGAATATTGTCTGCTTTCGTAATCTGAAGAAAGCGACCG ACGATGCTATTGCCCTGTTCTCGAACAAAGATGCTTCTTCTGTGGTGCTGGTGAAGCCCTTTGACGAGTACTTTGGGGAT TATCAGGACGCTGTAGATCGTTTGTTAGCGCTGACGCCAACGGTGGAGAGCGTGGACGGTTTACCGGATGAAGAGGCACA GCTGGCATTTGTAACAGCATTTCGCGATGTGATGCGTTTGAAAAACATCCTCGAAAGCTTTGCCGATTTTGACGATGCGG CTAAACCGCTATCGGACCAGACGCTGGCGGATTTCACCAGTAAGTACCTCGATATTCACGACAAGGTGAAAAAGCACTCC AGTAAAGAGAAAGTCTCGATTCTTGAAGACGTGGATTTTGAAGTCTCGCTGATTCATCGCGACGAAATTAACGTCGGCTA CATTCTGCGTCTGCTGGCAGGCATTCAGGCGATGCCGCCAAAAGAGCAGCAGGAGCAGAAGAAAAAGATCATGGATATTG TCGACAGCGACGTCACGCTGCGCAGTAAACGTGAGCTTATCGATAACTTTATTGAAAAAAGTTTGCTGCATGCCTCGCAT GACGAAGATATCACTCAGGTGTTTGAAGCCTATGTCGAACAGGAAAAAGGTAAGGCGCTGGCTACCCTGTGCAGCGAAGA GCGACTCGACTCCATCAAACTGACCGGCTTACTGGATAACTACCTCTTTACCGACGTGATGCCGCGAGAGGATGAAGTGG CAGAAACGCTGACCTGGACGCCGAAGATTCTGGAACGCAAAAACGTGCGGGCACGTGTCTATGACCGTGTGCGTGATGTG ATTGAAACATTTATCAATGGGATGCGCGGGTTTTAA Protein sequence : MATQSEYELETQLVEQLVGMHYERVNVTDEASMKANLRKQIEIHNRLEQAPLTDSEFNRIFLHLTKGNEVIDRAKILRDR YQLLRDDGTEKWLSFINKEEWCQNEFQVTSQVKQFNAEQNTRKTRFDVTLLINGLPLVQIELKRRGLGLKEAFNQINRYH RDAFWVGSGLFQYVQIFIISNGVDTKYYANNRANHFEQTFFWTDEKNNPLKALEKFTDAFLKVCHIAKMITHYTVLNETR KCLMVMRPYQFYACEAMIHHVKDNLHKQGRPENGYIWHTTGSGKTLTSFKASQVIMEMPEVDRVIFVVDRRDLDYQTAKE FNGFAKDSVDTTNNTSTLIKHLKQSSTKLTLTTIQKLNNAITHEGYKAQLAHLRKERIVFIFDECHRSQFGDTHKAIVNF FENAQLFGFTGTPIFANNVNITNGVKQTTELLFDKCLHKYVIVDAIRDENVLRFAVEYVGTYKRKESSNEIDIDVEDIDT KEVMESDIRLGKITDYILAHHNAKTRNREFTAMFCVGSVDMLITYYKLFKEKQAALQAADANYKPLKIATIFTYAANEAD KSDKEAVNGLLDEEDISLPQGAKVDTSSRDHLDSFIEDYNELYGTSYSANDSKSFYNYYKNIAQRTKEKGIDILLVVNMF LTGFDSPALNTLYVDKNLRFHGLVQAFSRTNRILNEKKSHGNIVCFRNLKKATDDAIALFSNKDASSVVLVKPFDEYFGD YQDAVDRLLALTPTVESVDGLPDEEAQLAFVTAFRDVMRLKNILESFADFDDAAKPLSDQTLADFTSKYLDIHDKVKKHS SKEKVSILEDVDFEVSLIHRDEINVGYILRLLAGIQAMPPKEQQEQKKKIMDIVDSDVTLRSKRELIDNFIEKSLLHASH DEDITQVFEAYVEQEKGKALATLCSEERLDSIKLTGLLDNYLFTDVMPREDEVAETLTWTPKILERKNVRARVYDRVRDV IETFINGMRGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 8e-167 | 43 |
