Gene Information

Name : Entcl_4440 (Entcl_4440)
Accession : YP_003943953.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 4806061 - 4806972 bp
Length : 912 bp
Strand : +
Note : PFAM: periplasmic solute binding protein; KEGG: ent:Ent638_1111 periplasmic solute binding protein

DNA sequence : 
ATGCACCCGACACCCGCCGTCCGGGCCCTGTTCCTCGGGGTCATCCTCAGTTCCGCCGGGTCTTTTCCGGCATGGGCGCA
GGAGAAGTTTAAGGTGGTAACCACCTTTACGGTGATTGCCGATATGGCGAAAAACGTAGCGGGCGATGCCGCAGAGGTGA
GCTCCATTACCAAACCGGGGGCCGAAATCCATGAGTATCAGCCCACCCCCGGCGACATCAAACGCGCGCAGGGCGCACAG
CTTATCCTTGCCAACGGCATGAATCTGGAGCGGTGGTTCCAGCGCTTTTATCAGCATCTGCGCGGCGTGCCGGAAGTGGT
GGTGACCGCAGGCATAACGCCGATGGGCATCACGGAAGGACCGTACAACGGGAAGCCGAATCCGCACGCGTGGATGTCGG
CGGATAACGCGCTTATCTATGTGAACAATATCCGCGACGCGCTGATGAAATACGACCCCGCTAACGCCGGGGTGTATCAA
CGCAATGCTGAAGCCTATAAGGCAAAAATTACCCAAACGCTGGAACCGCTGCGCCAGCAGGTTGCGGCTATTCCCGAAAA
CCAGCGCTGGCTGGTCTCAAGCGAAGGGGCGTTCTCCTACCTGGCGCGCGATCTTGGGTTAAAAGAGCTGTATCTGTGGC
CTATCAACGCCGATCAGCAGGGAACGCCGCAGCAGGTGCGCAAGGTGGTCGATGAGGTGCGTAAAAATCATATTCCGGCG
GTCTTTAGCGAAAGCACGATCTCCGATAAGCCCGCGCGACAGGTGGCCCGTGAGACCGGCACCCACTACGGCGGCGTGCT
GTATGTCGACTCGTTAAGCGCGCAGGACGGCCCGGTGCCGACCTATCTTGAGCTGCTGAACGTTACCACCCGCACCCTGG
TTCAGGGGCTTAAAGACGGCATGAAGGAGTAA

Protein sequence : 
MHPTPAVRALFLGVILSSAGSFPAWAQEKFKVVTTFTVIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGMNLERWFQRFYQHLRGVPEVVVTAGITPMGITEGPYNGKPNPHAWMSADNALIYVNNIRDALMKYDPANAGVYQ
RNAEAYKAKITQTLEPLRQQVAAIPENQRWLVSSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDEVRKNHIPA
VFSESTISDKPARQVARETGTHYGGVLYVDSLSAQDGPVPTYLELLNVTTRTLVQGLKDGMKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 7e-114 78
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 7e-114 78
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-114 78
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-114 78
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 7e-114 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_4440 YP_003943953.1 periplasmic solute binding protein BAC0349 Protein 3e-114 78
Entcl_4440 YP_003943953.1 periplasmic solute binding protein BAC0439 Protein 7e-90 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_4440 YP_003943953.1 periplasmic solute binding protein VFG0525 Protein 3e-114 78