Gene Information

Name : Entcl_4118 (Entcl_4118)
Accession : YP_003943635.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 4434340 - 4435755 bp
Length : 1416 bp
Strand : -
Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: cro:ROD_36391 replicative DNA helicase protein DnaB; SMART: AAA ATPase

DNA sequence :
ATGGCAGGAAATAAACCCTTCAACAAACAACAGACTGAACCCCGCGAACGCGATCTGCAGGTCGCCGGGTTGAAAGTACC
GCCGCACTCGATTGAAGCGGAGCAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAACGCTGGGATGATGTCGCCGAGC
GCGTCGTCGCTGACGATTTCTACACGCGCCCGCACCGCCATATCTTCACCGAAATGGGCCGTCTGCAGGAGACCGGCAGC
CCCATCGATCTCATCACGCTCGCTGAATCGCTGGAGCGTCAGGGACAGCTCGACAGCGTCGGCGGTTTCGCCTATCTGGC
GGAATTGTCAAAAAACACGCCAAGTGCGGCGAACATCAGCGCCTACGCCGATATCGTCCGCGAACGTGCCGTTGTCCGTG
AAATGATCTCCGTGGCGAATGAGATCGCCGAAGCGGGCTTTGACCCGCAGGGGCGCACCAGTGAAGATTTGCTCGACCTT
GCAGAGTCTCGCGTCTTCAAAATCGCCGAAAGCCGCGCCAATAAAGACGAAGGCCCGAAGAATATCGCCGAGGTGCTGGA
TGCCACCGTTGCGCGCATCGAGCAGTTATTCCAGCAGCCGCACGATGGCGTGACTGGCGTTAACACCGGCTATGACGATC
TCAATAAAAAGACCGCAGGCTTACAGCCGTCGGATTTGATTATCGTCGCCGCGCGTCCGTCGATGGGGAAAACGACATTT
GCGATGAACCTCGTTGAAAATGCGGCGATGTTGCAGGATAAACCGGTGCTTATCTTCTCGCTGGAGATGCCATCAGAACA
GATTATGATGCGTTCTCTGGCGTCGCTCTCGCGCGTGGATCAGACCAAGATTCGTACCGGCCAGCTGGATGACGAAGACT
GGGCGCGTATCTCCGGCACCATGGGCATTCTGCTGGATAAGCGTAATATATACATTGATGATTCCTCCGGCCTGACGCCT
ACGGAAGTGCGCTCCCGCGCGCGCCGTATCGCGCGCGAACACGGCGGGATTGGGCTTATCATGATCGACTACCTGCAGCT
GATGCGGGTACCGTCGCTGTCCGACAACCGTACCCTGGAAATCGCCGAAATCTCCCGCTCGCTGAAGGCGCTGGCGAAAG
AGCTGCAGGTCCCGGTGGTGGCGCTGTCGCAGCTGAACCGCTCCCTGGAGCAGCGTGCCGACAAGCGTCCGGTCAACTCG
GATCTGCGTGAATCAGGCTCCATCGAGCAGGATGCCGACCTGATTATGTTTATCTATCGTGATGAGGTGTATCACGAGAA
CAGCGATCTGAAAGGCATCGCTGAAATCATTATCGGTAAGCAGCGTAACGGCCCAATCGGTACGGTACGTCTTACCTTTA
ACGGACAATGGTCGCGCTTCGATAATTATGCCGGTCCTCAATATGATGATGAGTAA

Protein sequence :
MAGNKPFNKQQTEPRERDLQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMGRLQETGS
PIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
AESRVFKIAESRANKDEGPKNIAEVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF
AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGTMGILLDKRNIYIDDSSGLTP
TEVRSRARRIAREHGGIGLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-105 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-106 54
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-107 54
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-106 53
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-100 51
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-91 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-91 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-87 49
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-82 45