Gene Information

Name : Entcl_3858 (Entcl_3858)
Accession : YP_003943382.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : Pili assembly chaperone, N-terminal protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4142195 - 4142938 bp
Length : 744 bp
Strand : +
Note : PFAM: Pili assembly chaperone, N-terminal; KEGG: set:SEN2871 probable fimbrial chaperone protein

DNA sequence :
GTGAAACACAGCAGTATTGCCCGGGGCGTGGTGATTACCCTGGCGGCGTGGAGCCTGAACGCGCAGGCCGCCGTCAACGC
GGACCGTACGCGGGTCATCATGAACGGGAACGAAAAAACGGTCTCCGTCACCCTGACCAATGAGAACAAAACGATGCCCT
TTCTGGCCCAGTCCTGGGTGGATGACAGCAACGGCAGACGAAGCAGCATGCTGATGGTGCTGCCGCCGCTGCAGCGAGTT
GATGGCGGTCAGAAAACACAGGTCCGCATCATGCAGGTACAGGGGACCGGGCTGGATAAACTGCCGGCGGACCGGGAAAC
GCTGTTCTGGTTCAACGTCCGCGAAATCCCGCCAGAGCCGGAGACAACGAATGTCCTGCAGCTGGCCCTGCAGAGCAGGC
TGAAGCTGTTTTACCGTCCGGTTGCCATTAAAAAAGGCAGTAATGACACCTCAGAGAAAAAACTGACGGTGGAACGGGAG
GGAGGGAAGCTGGTCCTGAAAAATCCGACGCCTTACCACATCACCCTCGCCTGGCTGGGGACCACCCGTCGTGAGCGCCT
TGAAGGCTTCAGCGAGGGGGTGATGGTCTCCCCGCTGAGCACGCTGCCGGTAAAGGCCATCCTGCCGGCCGGGTCCACCC
GACTGTGGGTGGGGTACGTGGACGACTACGGCGGGCTGCAGATGAACCAGTACACCTGTAACGCGCAGCGTTGTGCCATG
TCACTGCGGGAGACAACACCATGA

Protein sequence :
MKHSSIARGVVITLAAWSLNAQAAVNADRTRVIMNGNEKTVSVTLTNENKTMPFLAQSWVDDSNGRRSSMLMVLPPLQRV
DGGQKTQVRIMQVQGTGLDKLPADRETLFWFNVREIPPEPETTNVLQLALQSRLKLFYRPVAIKKGSNDTSEKKLTVERE
GGKLVLKNPTPYHITLAWLGTTRRERLEGFSEGVMVSPLSTLPVKAILPAGSTRLWVGYVDDYGGLQMNQYTCNAQRCAM
SLRETTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-41 41
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 4e-41 41
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 4e-41 41
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 5e-41 41
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 5e-41 41
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 5e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_3858 YP_003943382.1 Pili assembly chaperone, N-terminal protein VFG1547 Protein 9e-42 41
Entcl_3858 YP_003943382.1 Pili assembly chaperone, N-terminal protein VFG0896 Protein 2e-41 41