Gene Information

Name : Entcl_3857 (Entcl_3857)
Accession : YP_003943381.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : fimbrial biogenesis outer membrane usher protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3188
EC number : -
Position : 4139647 - 4142148 bp
Length : 2502 bp
Strand : +
Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A3198 fimbrial usher protein

DNA sequence :
ATGAAACTGACCCGGCTCGCCATACTCATCACCCTGACGCTTTCCGCACGCCCGGTACTGGCCACGGAATTTAACGTCAA
TATGCTGAACACAGAGGACAGAAAAAACGCTGACCTCTCGGCCTTCAGCCGGGAAGGGTATATTGCACCGGGCAACTACC
TGCTGGATATCTGGCTGAACGAGCAGTCTGTCCGGGAGCAATACCCTGTCAGTGTGGTCCCGGTTAAGGGGGCCGGCAAC
GAGGAAGACTCCGTCATCTGCGTGACGTCTGAGCTGGTGGATATGCTGGGTCTGAATGCGGAGACTCTCAGTCGCCTGAA
ACCCGTTTCCGGTACACAGGGCGGACGCTGTCTGGACCTGCGCACCCCGGACAGTCAGGTGCGTTACAGCGCGGCGCAGC
AGCGGCTGACCTTTGTGATACCGCAGGCCTGGATGCAGTATCAGGACCCGAACTGGGTTCCCCCTGCCCGCTGGAGTCAG
GGCATCAGTGGCGCGCTGCTGGACTATAACCTGATGGTCAGTCGTTATATGCCGCAGCAGGGTACCTCCAGTACCAGCTA
CAGTCTGTACGGCACCGGTGGACTGAATCTGGGGGCCTGGCGACTGCGGAGTGACTGGCAGTACAGCCGGTATGACGCTG
GTCAGAGACGCACACAGTCCGATTTTTATCTGCCCCAGACCTATCTGTTCCGTCCTCTGCCGTCGGTGCGTTCCAGGCTG
ACGCTGGGGCAGACTTACCTCAATTCTGCCATTTTTGACTCCTTCCGTTTCGCCGGCGTCACGCTGGCCAGTGATGAGCG
TATGCTGCCACCGTCCCTGCAGGGGTATGCCCCGCAAATCAGCGGCATTGCGAACAGTAATGCTGAGGTCACCGTCAGCC
AGAACGGTCGCATCCTGTACCAGACCCGTGTGTCTCCCGGCCCTTTTGTCCTGCCTGACCTGAGTCAGAACATCAGCGGT
AATCTGGATGTCACGCTCCGGGAAAGTAACGGAACCACACGCACATGGCAGGTCAACACCGCCAGCGTCCCGTTCATGGC
CCGCCGGGGACAGTTACGTTATAAGGTGGCGGCTGGTCGTCCGCTGTACGGCGGGTCACACAATAACCGGGCGGTCAGCC
CGGACTTTCTACTGGGGGAGGTCACCTGGGGGGCCTTTAACAGCACCTCGCTTTACGGCGGGGTCATCGCCTCCACCGGG
GATTATCAGTCCCTTGCGCTGGGTGTCGGCCAGAACATGGGGATACTGGGAGCGGTGTCCGCGGATATCACCCGCTCGGA
TACCCGCCTTCCGCAGGGACTGCGTCAGACCGGATACAGTTACCGGATAAACTATGCCAAAACCTTCGATAAAACCGGCA
GCACCCTGGCGTTTGTCGGTTACCGGTTTTCAGACCGCCATTACCTGTCCCTCCCGGAATATCTGGCGCGCCGGGCGGTG
AACGGCGGTGACGTCTGGCACGAAAAGCAGAGTTACACCCTCACGTACAACCAGTATTTTTCCGCTCCCGCCATGAGCGC
CTCCCTGTCCGTCAGCCGGCTGGCTTACTGGAATGCGGAATCAAACAATAACTGGATGCTCAGTCTGAACAAAAGCTTCA
GCATCGGGGCCATTCGCGGAATTTCTGCCTCCCTGTCGCTGGCCCGTAACCAGTACGCCGGCGGCGGAACGCAGAACCAG
GTTTATGCCTCCGTGACCGTTCCCTGGGGGGAAGGACGTCAGGTCAGCTATAACGCGCAGCGGGATAACCGGGGAAGCCT
GCAGCAGAACGTCAGCTACAGCGATTTCAGCCATCCCGACACCACGTGGAATATCAGTGCCGGGCTGCGTCGTGATGACA
GTACCGGCAGCAACAGTAACTTCAGCGGCAGTCTCCAGAGCCGGATGCCCTGGGGACAGGTCAGCGCGGATGCCACCCTG
CAACCCGGTCAGTACCGCAGTCTGGGCCTGAGCTGGTATGGCTCGGCTACCGCCACGGCGCATGGCGCGGCCCTCAGCCA
GTCCCTGTCCGGTAATGAGCCGCGGATGATGGTGGATACCGGCGGCGTGGCCGGCGTCCCGGTCTCCGGCAACAGCGGCG
TGACCAACCGCTTCGGAATTGCGGTGGTCAGCGGCGGCGGCAGCTATCAGCGCAGCGACATCGCGGTCGACGTCACCCGT
CTGCCGGAGGATGTGGAGGTCAGTGATTCAGTTATCAGTCAGGTCCTGACGGAAGGGGCAATTGGTTACCGGCGTATCAG
CGCCAGTCGGGGGGCGCAGGTCATGGGACATATCCGCCTGGCTGACGGCAAAGCACCGCCGTTTGGTGCGCAGGTGATTT
CAGAGAAAACGGGTAAAACACCGGGGATGGTGGGCGATGACGGGCTGGCATATCTGACCGGTATCGGTGACGAAGACCGC
AGCGCGCTGGCGGTTTCCTGGAACGGGCGCGTGCAGTGCCGGCTGACCCTGCCGGCAGACCTGACGCTCAGCAAGGGGCC
GCTTCTGCTGCCCTGCCGGTAA

Protein sequence :
MKLTRLAILITLTLSARPVLATEFNVNMLNTEDRKNADLSAFSREGYIAPGNYLLDIWLNEQSVREQYPVSVVPVKGAGN
EEDSVICVTSELVDMLGLNAETLSRLKPVSGTQGGRCLDLRTPDSQVRYSAAQQRLTFVIPQAWMQYQDPNWVPPARWSQ
GISGALLDYNLMVSRYMPQQGTSSTSYSLYGTGGLNLGAWRLRSDWQYSRYDAGQRRTQSDFYLPQTYLFRPLPSVRSRL
TLGQTYLNSAIFDSFRFAGVTLASDERMLPPSLQGYAPQISGIANSNAEVTVSQNGRILYQTRVSPGPFVLPDLSQNISG
NLDVTLRESNGTTRTWQVNTASVPFMARRGQLRYKVAAGRPLYGGSHNNRAVSPDFLLGEVTWGAFNSTSLYGGVIASTG
DYQSLALGVGQNMGILGAVSADITRSDTRLPQGLRQTGYSYRINYAKTFDKTGSTLAFVGYRFSDRHYLSLPEYLARRAV
NGGDVWHEKQSYTLTYNQYFSAPAMSASLSVSRLAYWNAESNNNWMLSLNKSFSIGAIRGISASLSLARNQYAGGGTQNQ
VYASVTVPWGEGRQVSYNAQRDNRGSLQQNVSYSDFSHPDTTWNISAGLRRDDSTGSNSNFSGSLQSRMPWGQVSADATL
QPGQYRSLGLSWYGSATATAHGAALSQSLSGNEPRMMVDTGGVAGVPVSGNSGVTNRFGIAVVSGGGSYQRSDIAVDVTR
LPEDVEVSDSVISQVLTEGAIGYRRISASRGAQVMGHIRLADGKAPPFGAQVISEKTGKTPGMVGDDGLAYLTGIGDEDR
SALAVSWNGRVQCRLTLPADLTLSKGPLLLPCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfC CAD42029.1 PrfC protein Virulence PAI II 536 Protein 6e-130 41
papC AAZ04424.1 outer membrane usher protein Virulence PAI I APEC-O1 Protein 5e-128 41
papC YP_854254.1 outer membrane usher protein PapC Virulence PAI I APEC-O1 Protein 7e-128 41
papC NP_755465.1 PapC protein Virulence PAI I CFT073 Protein 8e-130 41
papC YP_002414015.1 Outer membrane usher protein PapC Not tested Not named Protein 7e-130 41
papC_2 NP_757034.1 PapC protein Virulence PAI II CFT073 Protein 8e-130 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_3857 YP_003943381.1 fimbrial biogenesis outer membrane usher protein VFG1548 Protein 4e-130 41
Entcl_3857 YP_003943381.1 fimbrial biogenesis outer membrane usher protein VFG0884 Protein 3e-130 41
Entcl_3857 YP_003943381.1 fimbrial biogenesis outer membrane usher protein VFG0895 Protein 3e-130 41