|
Name : Entcl_3621 (Entcl_3621) Accession : YP_003943146.1 Strain : Enterobacter cloacae SCF1 Genome accession: NC_014618 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3885593 - 3886978 bp Length : 1386 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: enc:ECL_00903 protein transport protein HofB DNA sequence : ATGAAACAGAACTCGCTCATGGCCCTGTGCCAGCGGCATCACGCGGTGCTATTAGCCAGCGACGAGCAGATGCTCAGTAT CGCGGTCGTCGGCAACCCCTCGCCGGAACTGATGCAGGCGCTGCGCTTTGCCACGCAGAAGCGGATCGATATCGAATGCT GGGATCGGCAAAAAATGGAGCAGCACCGGTCACGTGAGGCGCAAACGCACCTGCCCGCCGCGCGTGAAGAGAACGATAGC GTCGTCGACGTGCTCAACCAGGCCCTGCAGCGGGCGCTGCAGCAGCGCGCGTCGGATATCCATTTTGAACCCACCGAGGA TAACCTTCGGGTCCGGTTACGCATCGACGGCGTGCTGCATCCCTATTCCGAGCTGCCCGCCGCGATGAGCGCGTCGCTGG TGGCGCGTCTGAAGGTGCTCGGCGGTCTGGATATTGCAGAACGGCGGCTGCCGCAGGACGGGCAGTTTTCAGTTGAACTT AGCGATAGCACGACCTCTTTTCGCATTGCCACACTCCCCTGCCGTCATGGAGAAAAAGTCGTACTGCGTCTGCTCCAGCA GGCTGCGCAAACGCTTAATCTTTCTACCCTCGGCATGACGCCAGAGCAGCTCGGCGCATTTAACAACGCGTTACGCCAGC CGCAGGGGCTGATGCTGGTCACCGGGCCGACCGGCAGCGGGAAAACCGTCACGCTTTACAGCGCGCTGCAGGCGCGCAAC ACGCCCGAGGTGAATATCTGCAGCGTCGAAGATCCCATTGAGATCCCGCTGGCGGGCGTTAACCAGACGCAGATTAACCC GCGAAGTGGCCTGAACTTTCAGAGCGTTTTGCGCGCGCTGCTGCGCCAGGACCCAGATATCGTCATGGTCGGCGAAATTC GCGATGCAGAGACGGCGGAAATCGCCCTGAACGCCGCTCAGACCGGGCATCTGGTGCTGTCAACGCTGCACACCAACTCC ACTTGCGAAACGCTGGTGCGCTTACAGCAAATGGGCGTAGCGCGCTGGATAACCTCCTCGGCGCTGCTGCTGGTTGTCGC CCAGCGTCTGGTGCGCCGACTCTGCCCGCACTGCCGCCAGCAAAACGGCAGCCACGCCGCGCTGCCGCGCGCGCTGTGGC CCAGAGCGCTGCCCAGGTGGCGAACCGCTGGCTGCCCGCGCTGCTATGGCGGCTATCTTGGCCGCATTGCGCTTTTTGAA GTCCTCGTGATAACCGACGATATCCGCCAGCTTATCGCCAGCGGCGTCGATGCCGGAACCCTCGCGCGCATGGCCAGACA GACCAATATGATGACCCTGTTTGAACATGGCTGCCTGGCCGTGGAACGCGGCGAAACCAGCCAGGAAGAGCTGCTGCGGG TGTTGGGTATTCCGCATGGCGAATAA Protein sequence : MKQNSLMALCQRHHAVLLASDEQMLSIAVVGNPSPELMQALRFATQKRIDIECWDRQKMEQHRSREAQTHLPAAREENDS VVDVLNQALQRALQQRASDIHFEPTEDNLRVRLRIDGVLHPYSELPAAMSASLVARLKVLGGLDIAERRLPQDGQFSVEL SDSTTSFRIATLPCRHGEKVVLRLLQQAAQTLNLSTLGMTPEQLGAFNNALRQPQGLMLVTGPTGSGKTVTLYSALQARN TPEVNICSVEDPIEIPLAGVNQTQINPRSGLNFQSVLRALLRQDPDIVMVGEIRDAETAEIALNAAQTGHLVLSTLHTNS TCETLVRLQQMGVARWITSSALLLVVAQRLVRRLCPHCRQQNGSHAALPRALWPRALPRWRTAGCPRCYGGYLGRIALFE VLVITDDIRQLIASGVDAGTLARMARQTNMMTLFEHGCLAVERGETSQEELLRVLGIPHGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-61 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-61 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Entcl_3621 | YP_003943146.1 | type II secretion system protein E | VFG2426 | Protein | 2e-65 | 47 |
| Entcl_3621 | YP_003943146.1 | type II secretion system protein E | VFG2048 | Protein | 4e-62 | 45 |
| Entcl_3621 | YP_003943146.1 | type II secretion system protein E | VFG0182 | Protein | 2e-62 | 45 |
| Entcl_3621 | YP_003943146.1 | type II secretion system protein E | VFG1876 | Protein | 1e-60 | 43 |
