Gene Information

Name : Entcl_3551 (Entcl_3551)
Accession : YP_003943076.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : lysine decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.18
Position : 3801264 - 3803402 bp
Length : 2139 bp
Strand : -
Note : KEGG: cko:CKO_03180 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein

DNA sequence :
GTGAATATTATCGCCATCATGGGGCCGCATGGGGCCTGGCACAAGGACCAGCCCGTCAAGGAGCTGGAAGCCGCGCTGCT
ACAGCAGAGATTTAAAATCATCTGGCCGCAGAACAGCGCCGATCTTATCAAGCTCGTTGAGCAAAATCCGCGCATCTGCG
GCGTTATCTTTGACTGGGACGAGTATGGCGTTGAGCTCTGCAGCGATATTAATCAGCTCAACGAATACCTGCCGCTGTAT
GCCTTTATCAATACCCATTCGACGCTTGATGTCAGCGTGTACGATCTGCGCATGGCGCTATGGTTCTTTGAGTACTCGCT
GGGGACCGCAGAGGATATTGCGACCCGTATTGGTCAGTACACGCGGGAATATCTCGATAACATCACGCCGCCTTTCACCA
GGGCGCTGTTCAGCTACGTGAAAGAGGGCAAATATACCTTCTGCACGCCGGGACATATGGCGGGTACGGCCTACCAGAAA
AGCCCGGTAGGGTGCCTGTTTTATGATTTTTTCGGCGGCAACACGCTGAAAGCGGATGTGTCCATTTCGGTGACGGAGCT
AGGGTCGCTGCTCGATCACAGCGGCCCGCATCTGGAGGCCGAAGAGTATATCGCCCGCACCTTCGGCGCCGAGCAGAGCT
ACATGGTGACCAATGGCACCTCGACGTCGAATAAAATCGTCGGTATGTATGCGGCGCCTGCCGGCAGTACGCTGCTTATC
GATCGCAACTGCCATAAGTCGTTAGCGCATCTGCTGATGATGAGCGATGTCGTTCCCCTGTGGCTGAAGCCGACGCGCAA
TGCGCTGGGTATTCTGGGCGGGATCCCGCGTCGGGAGTTCAGCCATGAGAGCATTCAGCAGAAGGTGGCGGAGACGCAGG
GCGCCCAGTGGCCCGTCCATGCGGTCATTACTAACTCGACCTACGACGGTCTGCTGTACAACACCACGTGGATCAAAGAG
ACCCTGGACGTTCCCTCGATCCACTTTGATTCCGCCTGGGTGCCCTACACCCAGTTCCACCCGATCTATGACGGCAAAAG
CGGCATGAGCGGCGGGCGGGTGCCGGGAAAAGTGTTCTTTGAAACCCAGTCGACCCACAAAATGCTGGCGGCGCTCTCTC
AGGCTTCGTTGATCCACATTAAAGGCGACTACGACGAAGAGACCTTCAATGAAGCCTTTATGATGCACACCTCGACGTCG
CCGAGCTACCCGATCGTTGCCTCTATCGAAACGGCGGCGGCGATGCTGCGCGGCAACCCGGGGAAACGGCTGATTAACCG
CTCCGTTGAGCGGGCGCTGCATTTTCGCAAGGAGGTTCAGCGCCTGCGCGAGGAGTCTGACGGCTGGTTCTTCGATATCT
GGCAGCCGGAGACGGTCGAGCATGCGGAGTGCTGGCCGGTGGCGCCGGGAGAGGAGTGGCACGGCTTTAGCGATGCCGAT
ACCGACCATATGTTCCTCGATCCGGTGAAGGTGACGATTCTTACGCCGGGTATGGACGAACAGGGAACGATGAGCGATAC
CGGGATCCCGGCGGCGCTGGTGGCGAAGTTTCTCGACGAGCGCGGCGTCGTGGTGGAAAAAACCGGGCCGTATAACCTGC
TGTTCCTGTTCAGCATCGGTATTGATAAAACCCGGGCAATGAGCCTGCTGCGCGGCTTAACCGAATTTAAGCGCGCCTTT
GATCTCAACCTGCGGGTGAAGAATATGCTGCCGGATCTGTACGCGGAGGATCCTGATTTCTACCGCAACATGCGCATTCA
GGATCTGGCCCAAGGGATCCACCAGCTGATTCGTCAGCATCAGCTTTCTCACTTGATGCTGCGGGCGTTTGACGTGTTAC
CGGAAATGAAGATGACGCCCCATCAGGCCTGGCAGCGCCAGATCAAAGGCGAGGTTGAAACAGTCGAGCTGGAGCAGCTG
GTCGGGCGAATCTCCGCCAACATGATCCTGCCGTATCCGCCCGGCGTGCCGCTGCTGATGCCCGGGGAGATGATCGCCGA
GGAGAGCCGGGCCGTGCTCGATTTTCTGCTGATGCTGTGCTCCATTGGCCGCCATTATCCGGGGTTTGAGACGGATATTC
ACGGCGCTAAGCGCGGCGACGACGGCGTCTACAGAGTGCGCGTCTTAAAAGACGCGTGA

Protein sequence :
MNIIAIMGPHGAWHKDQPVKELEAALLQQRFKIIWPQNSADLIKLVEQNPRICGVIFDWDEYGVELCSDINQLNEYLPLY
AFINTHSTLDVSVYDLRMALWFFEYSLGTAEDIATRIGQYTREYLDNITPPFTRALFSYVKEGKYTFCTPGHMAGTAYQK
SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHSGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFSHESIQQKVAETQGAQWPVHAVITNSTYDGLLYNTTWIKE
TLDVPSIHFDSAWVPYTQFHPIYDGKSGMSGGRVPGKVFFETQSTHKMLAALSQASLIHIKGDYDEETFNEAFMMHTSTS
PSYPIVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPETVEHAECWPVAPGEEWHGFSDAD
TDHMFLDPVKVTILTPGMDEQGTMSDTGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMSLLRGLTEFKRAF
DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHQLIRQHQLSHLMLRAFDVLPEMKMTPHQAWQRQIKGEVETVELEQL
VGRISANMILPYPPGVPLLMPGEMIAEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRGDDGVYRVRVLKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 71
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_3551 YP_003943076.1 lysine decarboxylase VFG1670 Protein 0.0 63