Gene Information

Name : Entcl_3519 (Entcl_3519)
Accession : YP_003943047.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : lysine decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.18
Position : 3766654 - 3768798 bp
Length : 2145 bp
Strand : -
Note : KEGG: kpu:KP1_1410 lysine decarboxylase 1; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein

DNA sequence :
ATGAACGTTATTGCAATCATGAATCACACGGGTGTCTACTTTAAAGAAGAACCTATCCGTGAACTGCACCGTGCCCTTGA
GCGCCTGGATTTCGGCATTGTTTACCCGAACGACCGCGAAGATCTGCTGAAACTTATCGAAAACAATGCGCAGCTGTGTG
GTGTGATTTTCGACTGGGACACATACAATTTCGAGCTGTGCGAAGAAATCAGCGAAATGAACGAATACATGCCGCTGTAT
GCGTTTGCTAACACTTATTCCACTCTGGACGTTAGCCTGAACGATCTGCACATGCAGGTTCGTTTCTTCGAATATGCGCT
GGGCGCAGCAGATGATATCGCGGCTAAAATCAAACAGAACACCGACGAATATATCGACACCATTCTGCCGCCGCTGACCA
AGGCGCTGTTCAAATACGTCCGCGAAGGCAAATACACCTTCTGCACCCCTGGCCACATGGGCGGTACCGCGTTCCAGAAA
AGCCCGGTAGGTAGCCTGTTCTATGATTTCTTCGGTGCTAACACCATGAAATCCGATATCTCCATCTCCGTGTCCGAGCT
GGGCTCCCTGCTCGACCACAGCGGTCCGCATAAAGAAGCCGAAGAGTACATCGCCCGCGTCTTCAACGCTGAACGCAGCT
ACATGGTGACCAACGGTACGTCTACCGCGAACAAAATCGTCGGTATGTATTCCGCCCCGGCGGGCAGCACCGTTCTTATC
GACCGTAACTGCCACAAATCGCTGACCCATCTGATGATGATGAGCGACATTACGCCGATTTACTTCCGTCCGACCCGTAA
CGCCTACGGCATCCTCGGCGGTATTCCGCAGAGCGAATTCCAGCACGCGACCATCGCCAGGCGCGTCAAAGAGACGCCGA
ATGCAACCTGGCCGGTACACGCGGTTATCACCAACTCCACCTATGACGGCCTGCTGTACAACACTGATTTCATCAAGAAA
AATCTGGATGTGAAATCCATCCACTTTGACTCCGCCTGGGTGCCTTACACCAACTTCTCGCCGATTTACGAAGGTAAATG
CGGTATGAGCGGCGGCCGTGTGGAAGGGAAAGTGATTTATGAAACCCAGTCCACCCATAAACTGCTGGCGGCGTTCTCGC
AGGCTTCCATGATCCACGTTAAAGGCGACGTCAACGAAGAAACCTTTAACGAAGCGTTCATGATGCACACCACCACTTCT
CCGCACTACGGTATCGTGGCGTCCACCGAAACCGCAGCGGCGATGATGAAGGGTAATGCGGGTAAGCGCATGATCAGAGG
CTCTATCGAGCGCGCTATCAAGTTCCGTAAAGAGATCAAACGCCTGAAAGGCGAATCCGACGGCTGGTTCTTCGACGTAT
GGCAGCCGGAACATATCGATAAGCCGGAATGCTGGCCGCTGCGTTCTGACAGCGCATGGCACGGTTTCAAAAACATCGAT
AACGAGCACATGTCCCTTGACCCAATCAAAGTCACTCTTCTGACTCCGGGGATGAAGAAAGACGGTACCATGGATGATTT
CGGCATCCCGGCAAGTATCGTTGCGAAATACCTTGATGAACACGGCATCATTGTTGAGAAAACCGGTCCGTACAACCTGC
TGTTCCTGTTCAGCATCGGTATCGACAAAACCAAAGCGCTGAGCCTGCTGCGCGCGCTGACCGACTTCAAACGCGCGTTC
GACCTGAACCTGTGCGTGAAAAACATTCTACCGTCGCTGTACCGTAAAGCTCCTGAGTTCTATGAAAATATGCGCATTCA
GGACCTGGCGCAGAACATCCACAAACTGGTTGAGCATCACAACCTGCCGGACCTGATGTTCCGCGCCTTCGAAGTGCTGC
CGGCCATGGTCATGACCCCGTACACCGCGTTCCAGAAAGTGTTGCACGGTGAAGTGGAAGACGTTTGCCTCGAAGAGATG
GTTGGCCGCGTCAACGCCAACATGATCCTGCCGTATCCTCCGGGAGTGCCGCTGGTGATGCCGGGCGAAATGATCACCGA
AGAAAGCCGTCCGGTACTGGAGTTCCTGCAGATGCTGTGCGAAATCGGCGCCCACTACCCGGGCTTCGAAACCGATATCC
ACGGCGCATATCGCCAGGAAGACGGCCATTACGTCGTCAGTGTGCTAAAAGAAAACAACAAGTAA

Protein sequence :
MNVIAIMNHTGVYFKEEPIRELHRALERLDFGIVYPNDREDLLKLIENNAQLCGVIFDWDTYNFELCEEISEMNEYMPLY
AFANTYSTLDVSLNDLHMQVRFFEYALGAADDIAAKIKQNTDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSLFYDFFGANTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIARRVKETPNATWPVHAVITNSTYDGLLYNTDFIKK
NLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAFMMHTTTS
PHYGIVASTETAAAMMKGNAGKRMIRGSIERAIKFRKEIKRLKGESDGWFFDVWQPEHIDKPECWPLRSDSAWHGFKNID
NEHMSLDPIKVTLLTPGMKKDGTMDDFGIPASIVAKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
DLNLCVKNILPSLYRKAPEFYENMRIQDLAQNIHKLVEHHNLPDLMFRAFEVLPAMVMTPYTAFQKVLHGEVEDVCLEEM
VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQEDGHYVVSVLKENNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 92
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_3519 YP_003943047.1 lysine decarboxylase VFG1670 Protein 0.0 66