Gene Information

Name : Entcl_3281 (Entcl_3281)
Accession : YP_003942810.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : fimbrial biogenesis outer membrane usher protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3188
EC number : -
Position : 3503082 - 3505661 bp
Length : 2580 bp
Strand : -
Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_01281 outer membrane usher protein

DNA sequence :
ATGCCAGCGGGAAAAACGAACATGACGGCCCCTCACTGGCCTGCGCTGCGGCTGCTGGCGCTGGCGCTCTCCGGCGCCTG
GCTCTCTTCATCCGCCTGGGCTGAGAGCTACTTCAACCCGGCGTTTTTATCCGATGATGAAGCCGGTGTGGCGGATCTTT
CCCGGTTTGAGAAGGGCAACCAGCAGCCTGCGGGCGTGTACCGGGTGGATATCTGGCGTAATGAGGAGTTTATCGGCGCG
CAGGATCTGGCGTTTACCGCCGCCGGGGGTAAGCCCCCGACGGCTGGCGGGCTGGCGCCGTGTATTACCAGTTCGCTGCT
GTCGCGCCTTGGGGTGAACCGCGCGGCGTTTCCGGCGCTGGCGAAATACGCAACTGATACCTGCGTTCCGCTGGAAACGG
CGATTCCGGGCAGCGAAGCGGCGTTTGATTTCGCGGCGATGAAGCTCAGCATCAGCCTGCCGCAGGTGGCGATGCTTAAC
AGCGCCCGCGGCTACATTCCGCCGGAAGAGTGGGATGAGGGCATAACCGCCGCGCTGGCGAACTACAGCTTCAGCGGCAG
CAAAGGCACCAACGACGACAGCTACTTTCTCAGCCTGCAAAGCGGGCTGAACTACGGCCCCTGGCGGCTGCGCAACAACG
GCACCTGGAACTATTCGCGCAACGACGGCCAGCATCAGAACAGCTGGCGCAACGTGGCGACCTGGCTGCAGCGCGCCATT
ATTCCGTGGAAAAGCGAGCTGGTGCTCGGCGACAGCAATACCGGTAGCGACGTGTTTGACAGCGTCGGTTTTCGCGGCGG
CCGCCTCTACTCGTCTGACAGCATGTACCCCGACAGCTTACAGGGCTTTGCGCCGACGGTACGCGGTATCGCCCGCACGC
CCGCCAAAGTGACCATCCGGCAGAACGGGTATGTGGTGTATCAAAGCTATGTGCAAAGCGGCGCGTTCGCCATCAGCGAT
CTCAACCCGACGTCGTCAAGCGGCGATCTTGAGGTAACCGTTGATGAAAAAGACGGCAGCCAGCAGCGCTATACCGTACC
GTACTCCTCCGTACCGCTGCTGCAGCGCGAGGGACGAATAAAATACGATCTGGTGGCGGGAGACTACCGCTCGGGGAACA
ACGACCAGTCCACGCCGTTCTTTGCCCAGGGGACGCTAATCGCGGGCCTTGCCGGCGGGTTTACCCTTTACGGCGGCACG
CAGCTGTCGGAGCGCTACACGGCGGTCGCCATTGGCGCGGGGAAAAACTTCGGCGACTGGGGGGCGATTTCGCTCGACGT
TACGCACGCCCGCAGCCAGCTGGCGGACGACAGCCGCCACGAAGGGCAGTCCTTACGCTTTCTGTATGCCAAATCCCTCA
ACAGCGTCGGCACCAACTTCCAGCTGCTGGGATATCGCTATTCCACGGAGGGTTTCTTCACCCTGGATGACACCACGTGG
AAAACCATGAGCGGCTATCAGTACAGCGATGACCAAAAAGATAAAGACGGCGTGCCGGACATTATTAGCTACCACAACCT
GACGATGAACAAGAAAGGGCGTTTTCAGGTCAACGTGTCACAGTCGTTGGGGCGTTTCGGCTCGCTGTATGTTTCCGGCA
GCGAACAGAGCTACTGGGGCACCGGCGATACCAATACCTGGTATCAGTTTGGGTATTCCGGCGGCTGGCGCGGCGTCAGC
TATTCGCTGTCGTGGTCATGGAACCGCTCGGTCGGCATTCCGGGTACCGATCGCATTGCCGCCTTTAACCTTTCCGTGCC
GTTCAGTATTTTCAGTCCGGGGGAAGGGGCGCTGAACCGCGCCTACGCGACCGTTGCCGCCAGCCGCAACAGCGATGGTG
ATGACAGCTGGCAGAGCGGGGTGAGCGGAACACTGCTGGAAGGCAACAACCTCAGCTACAGCGTGACCCAGGGCAACGCC
AGCGGTCGGGGGGCGACCGGCAGCGCCAGCGCGAACTGGCAGGCCACCTATGGTACCCTCGGCGCGGCCTATAACTACGA
TCGCGACCAGCATGATTTCAACTGGCAGGCGGCGGGCGGCATTCTGGCGCACGCCGACGGCGTGACCTTCAGCCAGCCGC
TGGGCGACACCAACGTGCTGATTAAAGCGCCGGGCGCCACCGGCGTCAGCGTTGAAAACCAGACCGGCGTGAAAACCGAC
TGGCGCGGATATGCGGTGATGCCGTACGCCACGGTCTACCGCTATAACCGCGTGGCGCTGGATCCGAACTCGATGGGCAA
CAACACCGATATTGAAAACAACGTCAGCAGCGTCGTGCCCACCGAAGGGGCCGTGGTGCGCGCGGCGTTTGATACCCGCA
TCGGCGTGAGGGCGCTGATCACCGTCCGCCGCGGCGCGCAGCCGGTGCCGTTCGGCGCAATTGTGCGTGAAACCAGCCGG
GGGATAACCAGCATGGTCGGCGATGATGGTCAAATCTACCTGAGCGGTTTGCCGCTGCGCGGCGAGCTGTTAATCCAGTG
GGGCGACGGCGCCGCAGAGCAATGCCGCGCGCCGTACACGCTGCCCGAAAAGAGCCTGCAACAGGCTATCACCCTGACGG
AGGTTCGTTGTGATCGCTAA

Protein sequence :
MPAGKTNMTAPHWPALRLLALALSGAWLSSSAWAESYFNPAFLSDDEAGVADLSRFEKGNQQPAGVYRVDIWRNEEFIGA
QDLAFTAAGGKPPTAGGLAPCITSSLLSRLGVNRAAFPALAKYATDTCVPLETAIPGSEAAFDFAAMKLSISLPQVAMLN
SARGYIPPEEWDEGITAALANYSFSGSKGTNDDSYFLSLQSGLNYGPWRLRNNGTWNYSRNDGQHQNSWRNVATWLQRAI
IPWKSELVLGDSNTGSDVFDSVGFRGGRLYSSDSMYPDSLQGFAPTVRGIARTPAKVTIRQNGYVVYQSYVQSGAFAISD
LNPTSSSGDLEVTVDEKDGSQQRYTVPYSSVPLLQREGRIKYDLVAGDYRSGNNDQSTPFFAQGTLIAGLAGGFTLYGGT
QLSERYTAVAIGAGKNFGDWGAISLDVTHARSQLADDSRHEGQSLRFLYAKSLNSVGTNFQLLGYRYSTEGFFTLDDTTW
KTMSGYQYSDDQKDKDGVPDIISYHNLTMNKKGRFQVNVSQSLGRFGSLYVSGSEQSYWGTGDTNTWYQFGYSGGWRGVS
YSLSWSWNRSVGIPGTDRIAAFNLSVPFSIFSPGEGALNRAYATVAASRNSDGDDSWQSGVSGTLLEGNNLSYSVTQGNA
SGRGATGSASANWQATYGTLGAAYNYDRDQHDFNWQAAGGILAHADGVTFSQPLGDTNVLIKAPGATGVSVENQTGVKTD
WRGYAVMPYATVYRYNRVALDPNSMGNNTDIENNVSSVVPTEGAVVRAAFDTRIGVRALITVRRGAQPVPFGAIVRETSR
GITSMVGDDGQIYLSGLPLRGELLIQWGDGAAEQCRAPYTLPEKSLQQAITLTEVRCDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 2e-179 49
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 3e-178 48
lpfC YP_006098365.1 fimbrial outer membrane usher protein Not tested Tn2411 Protein 8e-131 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_3281 YP_003942810.1 fimbrial biogenesis outer membrane usher protein VFG0446 Protein 0.0 74
Entcl_3281 YP_003942810.1 fimbrial biogenesis outer membrane usher protein VFG1645 Protein 2e-178 48
Entcl_3281 YP_003942810.1 fimbrial biogenesis outer membrane usher protein VFG0876 Protein 1e-180 48
Entcl_3281 YP_003942810.1 fimbrial biogenesis outer membrane usher protein VFG0912 Protein 1e-177 48
Entcl_3281 YP_003942810.1 fimbrial biogenesis outer membrane usher protein VFG0454 Protein 2e-153 44