Gene Information

Name : Entcl_2953 (Entcl_2953)
Accession : YP_003942484.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3150553 - 3151275 bp
Length : 723 bp
Strand : -
Note : KEGG: ddc:Dd586_0644 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence :
ATGAATAACGCAAAGAAAATACTGCTGGTGGAAGACGATCGCGATATCGCCACCCTGCTGCGGCTGAATCTGCAGGATGA
GGGGTACAAGATTGTCCATGAGGCGGACGGCGCCCGGGCGCTGGCGTTACTCGATAAGCAGGTCTGGGACGCGGTGATCC
TCGACCTGATGCTGCCCCACGTCGACGGTCTCGAGATTTGTCGCCGCATTCGTCAGATGGCGCGCTATCTGCCGGTGATC
ATCATCAGCGCCCGCACCAGCGAAACCCACCGGGTGCTGGGGCTGGAGATGGGGGCGGACGACTACCTGCCGAAGCCGTT
TTCCGTGCTGGAGCTCATTGCCCGCGTCAAAGCGCTGTTTCGCCGCCAGGAGGCGATGGGGCAGAACATCCGTCTGGAAG
GCGGCATGATTAGCTGCCACGGCCTGGCTATCGACCCGCTGGCGCGCGAAGTGCGTCTGCGCGGCGAGCTGGTCGATCTT
ACGCCGCGCGAGTTTGACCTGCTTTACTGGTTCGCCCGTCATCCCGGCGAGGTGTTTTCCCGCCTGTCGCTGCTGGACAA
CGTCTGGGGCTATCAGCACGAAGGGTACGAGCATACGGTGAATACGCATATCAACCGCCTGCGGACTAAAATCGAGCGCG
ATGCCGCCGAGCCGGAGGTCATCCTCACCGTCTGGGGCAAAGGCTATAAATTTGCCGTCGAGAAACCGGAGGCGCAGCCA
TGA

Protein sequence :
MNNAKKILLVEDDRDIATLLRLNLQDEGYKIVHEADGARALALLDKQVWDAVILDLMLPHVDGLEICRRIRQMARYLPVI
IISARTSETHRVLGLEMGADDYLPKPFSVLELIARVKALFRRQEAMGQNIRLEGGMISCHGLAIDPLAREVRLRGELVDL
TPREFDLLYWFARHPGEVFSRLSLLDNVWGYQHEGYEHTVNTHINRLRTKIERDAAEPEVILTVWGKGYKFAVEKPEAQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-92 83
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-92 83

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-42 46
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-36 43
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-41 43
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 7e-35 41
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 3e-37 41
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator BAC0533 Protein 1e-29 41
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 1e-29 41
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 5e-41 41
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator VFG1563 Protein 1e-92 83
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator VFG1702 Protein 4e-93 83
Entcl_2953 YP_003942484.1 winged helix family two component transcriptional regulator VFG1389 Protein 2e-29 41