Gene Information

Name : Entcl_2936 (Entcl_2936)
Accession : YP_003942467.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 3134975 - 3136453 bp
Length : 1479 bp
Strand : -
Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: AAA ATPase

DNA sequence :
GTGGACCAGCTGAGTCAGTATTTGTGCGCCAGCGGCTACGCCAAAACGCACGGCGTGCTGGTGTGGGAAAACACCGTGTA
TCTTCGCGACGATGCGCCCGCCTTTGCGCTGCTCGAAATTCGCCGGGCGCTGGGGCAGGCCCCCGCGCCGGTGGTGGTGA
GCCCGGAGGCCTTTGATGAGCTGCTGGCAAAAGCGTGGCAGAACAGCAGCGGCGTGTCGCAGCAGCTGGTGGACGATATG
GATGCCGATATCGACCTGCTGGCGCTGACCGAAGAGATCCCCGACAACGAAGACCTGCTGGATAACGACGAAAACTCGCC
GGTTATCCGGCTTATCAACGCCATTCTCGGCGAAGCGGTGAAAGAGGGCGCTTCGGATATTCATATCGAAACCTTTGAGC
GCGCGCTGAGCATTCGCTTTCGCGTCGACGGCGTGCTGCGCCCGGTGCTGCAGCCCGCGCGCAAGCTGGCGCCGCTGCTG
GTTTCGCGCATCAAGGTGATGTCGAAGCTGGATATTGCGGAAAAACGCCTGCCGCAGGATGGCCGTATTTCGCTGCGTAT
CGGGCGTAAAGCGATTGATGTGCGCGTGTCGACCATTCCGTCGCAGTACGGCGAGCGGGTGGTTATGCGCCTGCTCGATA
AAAGCAACCTGCGCCCGGACATCGACAAGCTGGGGCTTATCGACGAGGAGCTGGCGCAGCTGAAGGGGCTGATTGCGCGT
CCCCACGGCATTATTCTGGTCACCGGTCCGACCGGTTCGGGGAAAAGCACCACCCTGTATGCGATTTTGTCGGCGTTAAA
CGGCCATGAGCGCAATATCCTGACCGTTGAAGATCCCATCGAATACGAACTGGAGGGCGTCGGGCAGACGCAGGTCAATC
CGCGCGTCGACATGACCTTCGCCCGCGGCCTGCGCGCGATCCTGCGCCAGGATCCGGACGTAGTGATGATCGGTGAAATT
CGCGACGGCGAAACGGCGCAGATCGCGGTGCAGGCGTCGCTCACCGGACATCTGGTGATGTCCACGCTGCATACCAACAG
CGCGGCAGGCGCCATTACGCGCTTACGCGACATGGGGCTGGAGCCGTTTTTGATAGGCTCGTCGCTGCTCGGGGTTATCG
CCCAGCGGCTGGTGCGCCGCCTGTGTCCGCACTGCCGGACGCAAAGCCTCCTTACCGACAGCGAGCGCGCGCTGTTCGGC
TTCATGCCGACGCCGCCGAAGGCGATTTATCGCGCCGTCGGCTGCGAGCAGTGCCGCCAGAGCGGCTATCAGGGGCGGGC
GGGCATCCATGAGTTTCTGGTGGTCGACAGCGCAATCCGCCGGGCCATCCATGAAGATGTCGATGAGATGGCGCTGGAGG
CGCAGTTCTTTAAACAGGCCAACAGCCTGCGGGAGAACGGTCTGCTGAAGGTGGTCGGCGGCGTGACCTCGCTTGAGGAA
GTGATGCGGGTCACCGCAGAACGCGGGGGAGACGACTAA

Protein sequence :
MDQLSQYLCASGYAKTHGVLVWENTVYLRDDAPAFALLEIRRALGQAPAPVVVSPEAFDELLAKAWQNSSGVSQQLVDDM
DADIDLLALTEEIPDNEDLLDNDENSPVIRLINAILGEAVKEGASDIHIETFERALSIRFRVDGVLRPVLQPARKLAPLL
VSRIKVMSKLDIAEKRLPQDGRISLRIGRKAIDVRVSTIPSQYGERVVMRLLDKSNLRPDIDKLGLIDEELAQLKGLIAR
PHGIILVTGPTGSGKSTTLYAILSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTFARGLRAILRQDPDVVMIGEI
RDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGLEPFLIGSSLLGVIAQRLVRRLCPHCRTQSLLTDSERALFG
FMPTPPKAIYRAVGCEQCRQSGYQGRAGIHEFLVVDSAIRRAIHEDVDEMALEAQFFKQANSLRENGLLKVVGGVTSLEE
VMRVTAERGGDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-124 58
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-124 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_2936 YP_003942467.1 general secretory pathway protein E VFG0182 Protein 2e-119 60
Entcl_2936 YP_003942467.1 general secretory pathway protein E VFG2048 Protein 3e-124 57
Entcl_2936 YP_003942467.1 general secretory pathway protein E VFG1876 Protein 1e-112 54
Entcl_2936 YP_003942467.1 general secretory pathway protein E VFG2426 Protein 9e-69 43
Entcl_2936 YP_003942467.1 general secretory pathway protein E VFG1880 Protein 4e-79 42