Gene Information

Name : Entcl_2490 (Entcl_2490)
Accession : YP_003942025.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : Fis family sigma-54 specific transcriptional activator PspF
Function : -
COG functional category : K : Transcription
COG ID : COG1221
EC number : -
Position : 2639280 - 2640248 bp
Length : 969 bp
Strand : +
Note : TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: cro:ROD_17051 PSP operon transcriptional activator; SMART: AAA ATPase

DNA sequence : 
ATGGCAGAATACAAGGACAACCTGCTCGGTCAGGCGAACAGCTTTATTGAGGTGCTGGAGCACGTTTCACGGCTTGCGCC
GCTGGATAAACCGGTGCTGGTCATCGGCGAGCGCGGTACCGGGAAAGAGCTTATCGCCAACCGACTGCACTTTCTCTCCG
CCCGCTGGCAGGGACCGTTTATCTCCCTGAACTGCGCGGCGCTCAATGAAAATCTGCTGGACTCTGAGCTGTTTGGCCAT
GAAGCGGGCGCGTTTACCGGCGCGCAGAAGCGCCATCCCGGGCGGTTTGAGCGCGCCGACGGCGGCACGCTGTTCCTCGA
CGAGCTGGCCACCGCCCCGATGCAGGTACAGGAAAAGCTGCTGCGGGTGATTGAATACGGCGAGCTTGAGCGCGTGGGCG
GCAGCCAGCCGCTGCAGGTCAACGTCCGCCTGGTGTGCGCGACCAACGCCGACCTGCCGCAGATGGTTAATGAGGGCGTC
TTTCGCGCCGACCTGCTGGACCGGCTGGCCTTCGACGTCGTCCGCCTGCCGCCGCTGCGCGAGCGCCAGAGCGATATCAT
GCTGATGGCCGACCATTTCGCCATCCAGATGTGCCGCGAGCTGGGGTTGCCACTGTTTCCCGGGTTTACCGAACACGCGC
AGGAAACGCTGCTCGGCTACCGCTGGCCGGGCAATATTCGTGAGCTTAAAAATGTCGTTGAGCGCTCGGTATACCGGCAC
GGCACGAGCGAGACGCCGCTGGACAACATCATTCTCGATCCCTTTAACCGCCAGGTACCGCCCGCCCCTGCCGGACATAC
CGGCGAACCCGTATTACCGCTGGATCTCCGCGAGTTTCAGCAGCAGCAGGAAAAGCGGCTACTGGAGCAGGCGCTGCAGC
TGGCCAAATTCAACCAGAAAAAAGCGGCCGCGCAGCTGGGCCTGACCTACCACCAGCTGCGGGCGCTGCTGAAAAAGCAT
CAGCTGTAA

Protein sequence : 
MAEYKDNLLGQANSFIEVLEHVSRLAPLDKPVLVIGERGTGKELIANRLHFLSARWQGPFISLNCAALNENLLDSELFGH
EAGAFTGAQKRHPGRFERADGGTLFLDELATAPMQVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPQMVNEGV
FRADLLDRLAFDVVRLPPLRERQSDIMLMADHFAIQMCRELGLPLFPGFTEHAQETLLGYRWPGNIRELKNVVERSVYRH
GTSETPLDNIILDPFNRQVPPAPAGHTGEPVLPLDLREFQQQQEKRLLEQALQLAKFNQKKAAAQLGLTYHQLRALLKKH
QL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 1e-37 43
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 1e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_2490 YP_003942025.1 Fis family sigma-54 specific transcriptional activator PspF VFG1214 Protein 1e-48 41