Gene Information

Name : Entcl_1801 (Entcl_1801)
Accession : YP_003941341.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1927158 - 1927895 bp
Length : 738 bp
Strand : -
Note : KEGG: cko:CKO_00995 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :

ATGCGCCGTTTGCTTTCCCTTTCGCTTGCTGCCCTGCTGCTGCTGTCGCCAGCCGCGTTCGCCCAATTGCCGGGACTGGT
CAGCCAGCCGCTGCCGGGGGGCGGCCAGAGCTGGTCGCTGCCGGTGCAAACGCTGGTCTTTATCACCTCGCTGACCTTCC
TGCCGGCAATCCTGCTGATGATGACCAGCTTCACCCGCATCATCATCGTGTTCGGCCTGCTGCGCAGCGCGCTCGGTACC
GCCTCTGCGCCGCCAAACCAGGTGCTGCTGGGGCTGGCGCTGTTTCTGACCTTTTTTATTATGTCGCCGGTTATTGATAA
AATTTACACCGACGCCTACCAGCCGTTTAACGACAATAAAATCACCCTGGAACAGGCTATCGACAAAGGGGCTCAGCCGC
TGCGCGAATTTATGCTGCGCCAGACCCGCGAGGCCGACCTGGCGTTGTTCGCCCGCTTATCCCACAGCGAACCGATTCAG
GGGCCGGAAGCGGTACCGATGCGCATTCTGCTGCCCGCCTACGTGACCAGCGAGCTGAAAACCGCGTTCCAGATAGGCTT
TACCATCTTCATTCCGTTTTTGATTATCGACCTGGTTATCGCCAGCGTGCTGATGGCGCTCGGGATGATGATGGTGCCCC
CGGCAACCATTGCGCTGCCCTTTAAGCTTATGCTTTTTGTTCTGGTGGACGGCTGGCAGCTGCTGGTCGGTTCGCTGGCG
CAGAGCTTTTACAGTTAA

Protein sequence :

MRRLLSLSLAALLLLSPAAFAQLPGLVSQPLPGGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRSALGT
ASAPPNQVLLGLALFLTFFIMSPVIDKIYTDAYQPFNDNKITLEQAIDKGAQPLREFMLRQTREADLALFARLSHSEPIQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	7e-30	43
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	7e-30	43
hrcR	AAT96262.1	HrcR	Virulence	S-PAI	Protein	3e-26	41
hrcR	AAT96303.1	HrcR	Virulence	S-PAI	Protein	3e-26	41
hrcR	AAT96343.1	HrcR	Virulence	S-PAI	Protein	3e-26	41
YPO0270	YP_002345352.1	type III secretion system protein	Virulence	Not named	Protein	3e-32	41
ssaR	YP_216427.1	type III secretion system protein	Virulence	SPI-2	Protein	2e-30	41
ssaR	NP_460384.1	type III secretion system protein	Virulence	SPI-2	Protein	2e-30	41
ssaR	CAA68199.1	secretion system apparatus, SsaR	Virulence	SPI-2	Protein	1e-30	41
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	5e-31	41
escR	NP_290283.1	type III secretion system protein	Virulence	LEE	Protein	2e-31	41
escR	AAK26700.1	EscR	Virulence	LEE	Protein	2e-31	41
escR	AAL57527.1	EscR	Virulence	LEE	Protein	2e-31	41
escR	CAC81847.1	EscR protein	Virulence	LEE II	Protein	2e-31	41
ECs4583	NP_312610.1	type III secretion system protein	Virulence	LEE	Protein	1e-30	41
escR	CAI43889.1	EscR protein	Virulence	LEE	Protein	2e-31	41
escR	YP_003223490.1	T3SS structure protein EscR	Virulence	LEE	Protein	2e-31	41
escR	AAC31528.1	L0049	Virulence	LEE	Protein	2e-31	41
escR	YP_003232138.1	type III secretion system protein	Virulence	LEE	Protein	2e-31	41
escR	ACU09473.1	type III secretion system protein EscR	Virulence	LEE	Protein	2e-31	41
escR	YP_003236103.1	T3SS structure protein EscR	Virulence	LEE	Protein	2e-31	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG2338	Protein	1e-89	83
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG2494	Protein	1e-75	69
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG1259	Protein	2e-63	62
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG2016	Protein	2e-60	56
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG0188	Protein	1e-33	42
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG0394	Protein	9e-32	42
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG0519	Protein	7e-31	41
Entcl_1801	YP_003941341.1	flagellar biosynthetic protein FliP	VFG0827	Protein	1e-31	41