Gene Information

Name : Entcl_1101 (Entcl_1101)
Accession : YP_003940652.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1153760 - 1155001 bp
Length : 1242 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: eck:EC55989_2909 integrase

DNA sequence :
ATGGCAAGACAAACCAAACCTCTATCCGTTAAAGAAATCGAATCTGCTAAACCCAAGGAAGCGGACTACGTTCTCTATGA
TGGCGATGGCCTTGAGCTACTTATCAAATCCAGCGGGAGTAAAATCTGGCAGTTTCGCTACATTCGTCCTGTCACCAAGA
AACGAGCGAAGAAGAGCATAGGCCCCTACCCGTCAGTTACGCTTGCCGATGCTCGAAGCTATCGGACAGAATCCCGTTCT
CTCCTGGCGAAACAAATCGATCCACAGGAACATCAGCAAGAACAGCTTCGCAGTTCGCTAGAAGCCAAAACCAATTCTTT
CCAGCTCGTAGCGGAACGTTGGTGGAATGTGAAGAAAGCTAGTGTGACAGAGGACTATGCGGAAGATATCTGGCGCTCAC
TTGAGAGAGATGTCTTCCCAGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTGCAG
CCAGTTCAGGCCAGAGGTGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGTATTAACGAAGTCATGATTTATGCGCAAAA
CACGGGCCTGATTGATGCGGTTCCCAGCGTAAACATCGGGAAAGCATTCGAGAAACCTCAGAAGAAAAACATGCCAAGCA
TCCGCCCGGATCAACTTCCACAATTGATGCAGACTATGCGTACGGCAAGTATTAGCCTGTCCACGCGCTGCCTATTCATG
TGGCAGCTTCTCACCATTACCCGCCCTGCCGAAGCTGCTGAGGCTCGATGGGATGAGATCGATTTCAATGCTAGCGAATG
GAAAATTCCTGCTGCTCGAATGAAGATGAACCGGGACCATACGGTTCCATTGTCAGATGAAGCAATTGCGATACTGGAGA
TGATGAAGCCGTTAAGTGGAAGTCGAGAATTTATCTTTCCCAGCCACATCAAGACAAATCAGCCGATGAACAGTCAAACC
GTTAACGCATCGCTGAAACGCGCAGGTTTTGGTGGGGTGCTCGTTTCACACGGTTTGCGATCTATTGCCAGTACAGCTCT
CAACGAGCAAGGTTTTCCGCCTGATGTGATTGAGGCTGCATTGGCCCACGTGGATAAGAATGAGGTTCGCCGTGCTTATA
ACCGCAGCGATTACCTGGAACAGCGTCGCCCGATGATGCAATGGTGGGCTGACTTCGTTATGGCTGCTGAGCACGGAAGT
ATGATTGGAAATGGCATTCGAGGTATAAGGCTTGTCGGCTAG

Protein sequence :
MARQTKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGPYPSVTLADARSYRTESRS
LLAKQIDPQEHQQEQLRSSLEAKTNSFQLVAERWWNVKKASVTEDYAEDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM
WQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGSREFIFPSHIKTNQPMNSQT
VNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVMAAEHGS
MIGNGIRGIRLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20803.1 integrase Not tested VPI Protein 3e-106 52
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-106 52
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-106 52
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-106 52
int AAK20773.1 integrase Not tested VPI Protein 3e-106 52
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 8e-107 48
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 4e-86 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-85 45
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-85 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_1101 YP_003940652.1 integrase family protein VFG1092 Protein 5e-86 45